Gene Nther_2218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_2218 
Symbol 
ID6315396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp2353829 
End bp2356489 
Gene Length2661 bp 
Protein Length886 aa 
Translation table11 
GC content45% 
IMG OID642644606 
Productprotein translocase subunit secA 
Protein accessionYP_001918372 
Protein GI188586827 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) 
TIGRFAM ID[TIGR00963] preprotein translocase, SecA subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000196185 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.00000000170911 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGGTAAAGA ATTTAATATA TAAGATTATT GGAGATCCCA ATGACAGGGA ATTAAAAAAA 
TTGCAAAAAT ATGTAGACAG GGTAAACGAA CTAGAGCCTG AAATCCAGGC TCTTTCAGAT
AATGAACTAA AAAATAAGAC TCCAGAATTC AAAAATCGCC TTGAACAGGG GGAGACCTTG
GAGGACTTGT TACCCGAGGC CTTTGCCGTG GTAAGAGAGG CCAGTAACAG AGTCCTGGGA
ATGCGCCATT TCGATGTTCA GGTTTTGGGT GGAGTTGTTC TACACCAGGG AAGGATTGCC
GAAATGAAAA CCGGTGAAGG TAAAACCCTG GTTGCCACAA TGCCTGCCTA TTTAAATGCC
TTAACGGGCA AAGGTGTGCA TATCATTACT GTTAACGATT ACCTGGCCCA GCGTGACAGT
GAATGGATGG GTGAGGTATA TAACTTTTTG GGACTAGAAG TAGGTTTAAT TGTCCACGGT
ATGAATTCCC AGGAGCGCAG GGAATCTTAT GCCTGTGATA TCGTCTTTGG GACAAACAAT
GAATTCGGTT TCGATTACTT AAGGGACAAT ATGGCTCTTT ACGAAAAGGA TTTGACCCAG
AGAGAGCTAA ACTTTGCCAT TATTGACGAG GTAGACAGTA TCCTGGTGGA TGAAGCCAGA
ACTCCATTGA TCATTTCCGG AGCTTCCGAC AAACCCAAGG AACTGTATTA CAAAATGGCC
AAGTTTGTAC CAATTCTCAA GCAAGATGAA GATTATACAG TAGATGAAAA GGCCAATAGC
GTCATGCTCA CTGAAGATGG CGTTGATAAG GCGGAACGCT TTTTAGGTGT GGATAATCTA
TATGATGATA CCAACCTAGA GCTGTCTCAC CACTTGAACC AGGCCCTAAA GGCCCACGCC
TTGATGAAAA GGGATAATGA CTATGTGGTG GAAAACGGCC AGGTGGTCAT AGTAGACCAG
TTCACAGGCC GAAAAATGCC AGGTAGACGA TACAGTGACG GCCTTCACCA GGCCATTGAG
GCCAAGGAAG GTGTGCAGAT AGAAAAGGAA AACCAGACAC TTGCCAGTAT TACTTTCCAG
AACTTCTTTA AGCTGTACAA CAAGCTCTCG GGTATGACCG GAACAGCTGC TACTGAAGAA
GAGGAATTCC AGGAAATATA CGGTATGGAT GTGGTGATTG TTCCCACCAA TGAACCCATG
ATCAGAGAAG ACCTACCTGA CCGAGTTTAC AAGACGGAAG AGGCCAAGTT CCAAGCTGTG
GCCGACGATA TAGAAGAATG TTACAACCGA GGTCAGCCGG TACTAGTGGG TACAGTGTCC
ATTGAAAAGT CCGAGGAACT TTCCCATATG TTGAAAAAAC GCGGAGTTTC TCATCAAGTT
CTGAATGCCA AGCATCACGA AAAAGAGGCG GAAATTATCA AAAATGCCGG CCAAAAGGGC
ACTGTAACCA TTGCCACTAA CATGGCTGGT AGGGGTACCG ATATTGTCCT AGGACCCGGT
GTAAAAGAGC TGGGCGGCCT TTATGTCATC GGTACCGAAC GTCACGAAAG TAGAAGGATT
GATAATCAGC TGCGAGGTCG TTCCGGAAGA CAGGGTGATC CCGGTGCCAG TAGATTTTAC
GTCTCTTTAG AAGACGATTT GATGCGATTA TTTGGTTCAG ACAATATTTA TTCTATGATG
GATAAGCTGG GTATGGAAGA AGATCAGGCC ATTGACTCTT CCTTTGTCTC CAGTGCCATT
GAAAATGCTC AGAAGAAGGT AGAAGGTAGA AACTTCAGTA TCCGAAAACA TGTCTTGGAA
TACGATAATG TTATGGATCA GCAGCGTAAG GTAATCTATG AACAAAGAAG ACAGGTCTTG
CAAGGTGATA ACCTGCGGGA CGAAATCATG GATATGATCT CAGATGTAAT TGAGGAAGCC
ATTGAAAGTT ACGCTTCCGA GAAGATATAT CCCGAGGAAT GGGATTTAGA TGCCTTGATG
CAATTCGGGC GAAAGAGCTT CTTGCTTCCT GAAAAGGGCA GTGTCCAGGA ACTTAAAGAA
CTTACAAATG ATAAAGAACC CAAAGAAGCC ATTGATGCCA TGCGCGAATA TCTTATGGAT
CTGGCCAAGG AAGCTTATCA GGAAAAAGAA GATGAAATTG GCGAAGAGCG CATGCGCGAG
GTAGAACGGG TTATCCTGCT GCGAGTTGTG GATTCCAAGT GGATGGATCA CTTGGATGCC
ATGGAACAGC TTCGACAGGG TATTGGCCTG CGGGCATACG GTCAGAAGAA CCCGCTGGTT
GAGTATAAGT ACGAAGGTTA TCAGATGTTC CAGAATATGA TTGCCTCTAT TAAAGAAGAA
GTTACTCGAT TAATTCTCAG AGTAAAGATC AACGAACAAG AGGCACCTAA GCGTCAATCA
GTTGCCAATG TGAGTGGCCA ACAAGGCGGT GGAGGCGCTA CTAGAAGTTC CTTCCAGGAC
CACGGAAATC CAGCTGGTTC TGCAGGTGGT GGAGCAAAAA CGGCCTCAGG TGGAGGCTCA
GAAGGAACAG CTAGTGGTAA TGAATCTCAA GAACAGCCCA AGAAAACTCC CATTCGCCGG
GGTAAAAAGA TCGGCCGAAA TGAGCCGTGC CCCTGCGGAA GTGGTAAAAA ATACAAGAAA
TGCTGTGGCA AACCGGCTTA A
 
Protein sequence
MVKNLIYKII GDPNDRELKK LQKYVDRVNE LEPEIQALSD NELKNKTPEF KNRLEQGETL 
EDLLPEAFAV VREASNRVLG MRHFDVQVLG GVVLHQGRIA EMKTGEGKTL VATMPAYLNA
LTGKGVHIIT VNDYLAQRDS EWMGEVYNFL GLEVGLIVHG MNSQERRESY ACDIVFGTNN
EFGFDYLRDN MALYEKDLTQ RELNFAIIDE VDSILVDEAR TPLIISGASD KPKELYYKMA
KFVPILKQDE DYTVDEKANS VMLTEDGVDK AERFLGVDNL YDDTNLELSH HLNQALKAHA
LMKRDNDYVV ENGQVVIVDQ FTGRKMPGRR YSDGLHQAIE AKEGVQIEKE NQTLASITFQ
NFFKLYNKLS GMTGTAATEE EEFQEIYGMD VVIVPTNEPM IREDLPDRVY KTEEAKFQAV
ADDIEECYNR GQPVLVGTVS IEKSEELSHM LKKRGVSHQV LNAKHHEKEA EIIKNAGQKG
TVTIATNMAG RGTDIVLGPG VKELGGLYVI GTERHESRRI DNQLRGRSGR QGDPGASRFY
VSLEDDLMRL FGSDNIYSMM DKLGMEEDQA IDSSFVSSAI ENAQKKVEGR NFSIRKHVLE
YDNVMDQQRK VIYEQRRQVL QGDNLRDEIM DMISDVIEEA IESYASEKIY PEEWDLDALM
QFGRKSFLLP EKGSVQELKE LTNDKEPKEA IDAMREYLMD LAKEAYQEKE DEIGEERMRE
VERVILLRVV DSKWMDHLDA MEQLRQGIGL RAYGQKNPLV EYKYEGYQMF QNMIASIKEE
VTRLILRVKI NEQEAPKRQS VANVSGQQGG GGATRSSFQD HGNPAGSAGG GAKTASGGGS
EGTASGNESQ EQPKKTPIRR GKKIGRNEPC PCGSGKKYKK CCGKPA