Gene Nther_2214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_2214 
Symbol 
ID6316594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp2350523 
End bp2351377 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content45% 
IMG OID642644602 
Producttransketolase subunit A 
Protein accessionYP_001918368 
Protein GI188586823 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3959] Transketolase, N-terminal subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.000519395 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.000381558 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCCATCA CGGCTAAAGA AAAAAGTTAT CTCAGTGAAA TGGCGTATAA AATCAGGGTA 
GAAACTTTAA AGATGCTTAA TAAAGCAGAA TCAGGCCATC CGGGCGGTTC CCTGTCCATG
GCTGATATAT TATCTTCCCT TTATTTTAAG CATATGAATA TAGACCCTGA AAACGGAGAA
GATCCCGATA GAGACAGATT GGTACTGAGT AAGGGCCATG GAGTGCCCGG CCTTTATTCT
GTATTGGCTT TAAAGGGTTT CTTTCCCTTA GATGAATTAC AAACCTTGAG AGACATTAAT
TCCAGGCTGC AAGGTCATCC CGATAGAAAA GGTACACCGG GTATCGAGAT GACAACTGGA
TCTTTGGGTC AAGGCCTGTC AGCAGCTAAT GGTATGGCCC TGGCTGCCAA GATGGACGGT
CGAGACTACA ATGTTTACTG CATTTTGGGT GATGGTGAGA TCCAGGAAGG TCAAATTTGG
GAAGCGGCCA TGACAGCTTC TCATTACAAG ATCGATAATT TGATTGGCAT TTTGGATTAC
AATGGCCTGC AAATCGACGG TAAAGTTGAA GACATTATGG ATCCTGGCCC GGTTTCCGAT
AAATGGCGAG CCTTTGGCTG GTATGTTATT GAGACCGATG GTCATGATCT GGAAAAGTTT
AATGCAGCTA TCGAAGAAGC CAAGGGAGTT AAAGATCAAC CTGTAATGAT CGTGGCAGAT
ACTGTTAAAG GCAAAGGAGT TTCATACATG GAAAATGTAG TTGACTGGCA CGGTAAGGCG
CCAGGAGACG AGGAACTAGA GCAGGCATTA GAAGAACTTG AACAAGGCCT AGCAGGCACA
AGGGGGGAAG AGTAA
 
Protein sequence
MAITAKEKSY LSEMAYKIRV ETLKMLNKAE SGHPGGSLSM ADILSSLYFK HMNIDPENGE 
DPDRDRLVLS KGHGVPGLYS VLALKGFFPL DELQTLRDIN SRLQGHPDRK GTPGIEMTTG
SLGQGLSAAN GMALAAKMDG RDYNVYCILG DGEIQEGQIW EAAMTASHYK IDNLIGILDY
NGLQIDGKVE DIMDPGPVSD KWRAFGWYVI ETDGHDLEKF NAAIEEAKGV KDQPVMIVAD
TVKGKGVSYM ENVVDWHGKA PGDEELEQAL EELEQGLAGT RGEE