Gene Nther_2203 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_2203 
Symbol 
ID6314875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp2339430 
End bp2340734 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content37% 
IMG OID642644591 
Productdiguanylate cyclase and metal dependent phosphohydrolase 
Protein accessionYP_001918357 
Protein GI188586812 
COG category[T] Signal transduction mechanisms 
COG ID[COG2199] FOG: GGDEF domain
[COG2206] HD-GYP domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTCAT TGTATATAGA AGGTGGCAGA ATTTTCATTA AAAAAGGTGA TTTTCACTGT 
CAAGTAGTTG GGGGATTGTC AATTCTGACA GGAATATCTG GTGTTATAAA CCCTATTGCT
GTAGGTCAGT GGTGGTACGA CCCTTGGGTT TTTTTGATCA CATTTGTATT GAATTTAGCC
CTAGCCCTAG GAATTTTATG GCTCTATATG AGAAGGTTAA ATCAAGACTT GTTAGAGCTA
AACACACGCA TGCAAAAGCA CATTGACAAA CTAGAGCATT TGAGCTTACA CGATCAACTG
ACAGGTATCT ATAACAGGGC TTATTTTGAA GAGGAACTTG AACGACTGGA TAACAGTCAG
GAGTATCCTG TGACTGTTAT TTCTTTTGAT GTGGATGGTT TAAAGTTAAT TAACGATACC
ATAGGACATG AGCAGGGAGA TGAGCTGATT AAAACTGCAG CTAAAATTAT TGATAAATCC
CTAAGGTCTT CAGATATTTT TGCCAGAGTA GGGGGAGATG AGTTTGCAAT TTTACTTCCC
AATACAAATA ATTCAAATGG GGGCAAGGTG GTCAACAGGA TTTTAAATAA CATTCAAAAA
TATAATCAGA AAAATGGTAA GCTACCCGTT CAAATATCAG TGGGTAAGGC AACGGCAAGT
TATCCTGAAG AATCATTAAA GGGTGCTTTG ACTGAAGCTG ATAAAAATAT GTATCAAAAT
AAAATGCGAA TTGAATTGAG GGACAATTCA CCCCTTGTGA ATCTATTTAT CAAACGACCT
CTTGAAAGGG ATTATTCAAC TACGGATCAT GCTAATAGAA TTGGGGAATT AGGTAAGGAA
CTGGGCAGGA GATTACAGTT ATCCCAAGAC AGCTTAATGA AAATTGATTT ACTGGCTAAA
ATACACGATA TTGGCAAAGG TGGCATCCCC GATGGAATCT TATTCAAACC TGGACCTCTT
GATAAGAGAG AATGGGAAAT AATGAAACAA CATTCTGAAA GAGGTTATAA AATTGCTTTA
TCGTGTCCTG ATTTGATTGA TGTAGCAGAC TTAGTGTTAA AACATCATGA AAGTTGGGAT
GGAACAGGTT ATCCCCTGGG ATTAAAAGAA GATGAAATCC CCATAGAATG TAGGATTCAT
TCGATAGTTG AAGCTTATGA TGCTATGACT AGAGATCGAC CTTATAGGAA AGCATTATCA
CAAGAGCAAG CTCTGGAAGA ACTTAAGCGC TGTAAGAGTG GGCAGTTTGA TCCTAAAATT
GTAGAGGAGT TTCAGGCTAT TTTATATTTG AAAAGGAGCT GTTAG
 
Protein sequence
MASLYIEGGR IFIKKGDFHC QVVGGLSILT GISGVINPIA VGQWWYDPWV FLITFVLNLA 
LALGILWLYM RRLNQDLLEL NTRMQKHIDK LEHLSLHDQL TGIYNRAYFE EELERLDNSQ
EYPVTVISFD VDGLKLINDT IGHEQGDELI KTAAKIIDKS LRSSDIFARV GGDEFAILLP
NTNNSNGGKV VNRILNNIQK YNQKNGKLPV QISVGKATAS YPEESLKGAL TEADKNMYQN
KMRIELRDNS PLVNLFIKRP LERDYSTTDH ANRIGELGKE LGRRLQLSQD SLMKIDLLAK
IHDIGKGGIP DGILFKPGPL DKREWEIMKQ HSERGYKIAL SCPDLIDVAD LVLKHHESWD
GTGYPLGLKE DEIPIECRIH SIVEAYDAMT RDRPYRKALS QEQALEELKR CKSGQFDPKI
VEEFQAILYL KRSC