| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_2201 |
|---|
| Symbol | |
|---|
| ID | 6314873 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010718 |
|---|
| Strand | + |
|---|
| Start bp | 2337209 |
|---|
| End bp | 2338912 |
|---|
| Gene Length | 1704 bp |
|---|
| Protein Length | 567 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 642644589 |
|---|
| Product | extracellular solute-binding protein family 5 |
|---|
| Protein accession | YP_001918355 |
|---|
| Protein GI | 188586810 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 61 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAATG CAGGACAATT TTTTAAGAAA TTTTCAGTAC TCATGGCAGT TTTAATAGTT
ACTACTGCGT TAGTAATCGG ATGTGGAGAC GGTGGCGATC CAGACGCATC TGATGATTTG
GACCCAGATA GAAAGGTTCC AGAAGTAAGA TTTGTTTCAT CCACTGCTGA TGATAACCAG
ATAAGAAATG AAGCAGTACA GCTAGTTGCT GACTGGTGGG AAGAAATCGG TTTAGAAGTA
GATATTCAAA CCAGAGAGTT TAACTCTCTA GTCAACAGAG TATTGGCTGC CCCCGAAGAT
AAGGATTTCG AAGCATATAT TCTAGGTTGG AGTGGTAGAG TATCAAGATC AGACCCTGAT
ATGTTCCTTT ATTCCTTATA TCATTCCAAT CAAGCTGTAG ATGGCGGTAA CAACAGTAGT
GTTTTCAAAA ATGAAAAGTA TGATGAACTT GTTTCGAAAC AAAGAGCGGA AATGGATCTA
GAAAAGCGAC AAGAACTCGT CTTTGAGGCC CAGGAAGTCC TGGCAGAAGA AGTTCCTGAT
ATCACCCTAT ATTACAGAGA CGAAATTCAA GGTTATAACA ATGAGCGATG GGAAGATCTA
CCAAGTATGG CGGGAGAAGG TATCTTTAAC GAACAGTTCC CCTATGAGGC TACTCCCAAA
ACAGATGATG CAGAGTTTGT AATAGCTAAC TCCGCAAACT TGGATACATT TAACCCCTTT
GCGGCAGAGA CAGTTTACGA ATGGAAATTT TTACGACTTG TTTACGACAA ATTAGTTAGA
TTAGATGAGA ATTTTGAGCC CCAACCCTGG GCAGCAGAAG AAATCAACGT AGTAGAAGGC
GAAGACGGTG AAGTAATAGA TGTAACCTTG AGAGATGATT TACAGTTCCA CGATGGAGAA
CCACTTGGGC CAGAAGATGT TGTCTTTACT TTCGACTACA TGTTTGAAGA AGGCATACCT
TATTTCCAAG CCTTTTTAGA CCCAATTGAA ACAGTAGACC TCATGGACGA TGATGAAACT
ATCAGATTTA CTTTAGAAGA AGCTTATGCA CCCTTTATAA CCAATACTTT AGGTCAAATT
CCTATCTTAC CAGAACACAT CTGGGCTGAT GTTATGGAAG AAGAAAATTT AGATCATCCT
TCTCAGTTCG ACAATGCCGA AGCTATCGGA AGCGGTCCTT TCAAATTTGA CAATTGGGAA
AGAGGCGAGT ACATCAGAAT TGTTAAAAAC GATGATTACT TCAAAGCTGA TGATATCGAT
GTGGAAGCTA TCAGATACGA CAAGTACAGC CATTCTGAAG GAGTTTTCGG TGCCCTGGAG
AACCAACAGG CCGATGTAAA CGAAAACACT TTTGACCCTG AATACGTTCA ACAAGCAGAA
GATCTTGATC ATTTAACAGT AGTTAGAGAA CCCGATATCG GCTTTGACTT CATTGGCCTC
AATAACTACA AAGAGCCTTT TAACGATAAA GCCGTAAGAC AAGCCGCTGC TCATGCCATC
GATTTAGATG AGCTTGTAGA CGTTCTCTTG TACGGTTATG GAGATCCAGC AGGTGCAGGT
CAGACTATTT CAACAGGTAA TGAAATGTGG AAAAATGACG ATGTAAAAGA ATATCCTTTT
GATATCGATA AAGCAAGAGA AATCTTAAAA GATGCCGGCT ATGAATGGGA TAGTGACGGA
AGATTATATT TCCCTGAAGA GTAA
|
|---|
| Protein sequence | MENAGQFFKK FSVLMAVLIV TTALVIGCGD GGDPDASDDL DPDRKVPEVR FVSSTADDNQ
IRNEAVQLVA DWWEEIGLEV DIQTREFNSL VNRVLAAPED KDFEAYILGW SGRVSRSDPD
MFLYSLYHSN QAVDGGNNSS VFKNEKYDEL VSKQRAEMDL EKRQELVFEA QEVLAEEVPD
ITLYYRDEIQ GYNNERWEDL PSMAGEGIFN EQFPYEATPK TDDAEFVIAN SANLDTFNPF
AAETVYEWKF LRLVYDKLVR LDENFEPQPW AAEEINVVEG EDGEVIDVTL RDDLQFHDGE
PLGPEDVVFT FDYMFEEGIP YFQAFLDPIE TVDLMDDDET IRFTLEEAYA PFITNTLGQI
PILPEHIWAD VMEEENLDHP SQFDNAEAIG SGPFKFDNWE RGEYIRIVKN DDYFKADDID
VEAIRYDKYS HSEGVFGALE NQQADVNENT FDPEYVQQAE DLDHLTVVRE PDIGFDFIGL
NNYKEPFNDK AVRQAAAHAI DLDELVDVLL YGYGDPAGAG QTISTGNEMW KNDDVKEYPF
DIDKAREILK DAGYEWDSDG RLYFPEE
|
|---|
| |