| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_2181 |
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| Symbol | |
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| ID | 6317207 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010718 |
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| Strand | + |
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| Start bp | 2307542 |
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| End bp | 2309326 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 642644568 |
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| Product | putative sigma54 specific transcriptional regulator |
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| Protein accession | YP_001918335 |
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| Protein GI | 188586790 |
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| COG category | [K] Transcription
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0517] FOG: CBS domain
[COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000000000000200827 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGACTTTT CCAATCTGAC AGTTTTAACA GCAGGGGATG CAGTCATTAA AGATATTTCT
ATTGTTTCAC CTAGTGCCAC AGTCAAAGAG TTAAATGAAA TTATGCTGCT AAAGAAAAAA
GAAGAAGTAC TGGTGATGGA AAATCAAGCT ATAGTCGGTG TGATTACAAA AAACGATTTA
GTAAAAAACT TAGCAACAGG AATAAAATGG GATACTGAAG TAAAATATAT CATGACACGT
AATGTCATCC GCTTTAAAGA CCACGAAGAT TTAACTGGAG TTCGGGACAA CATGCGATTT
CACGGTATTA AAAGAGCTCC TGTTTTAAAT GAAAATGAGG AATGCCTTGG CTTGATAACT
GTCAAATCTA TCTGTGACGC ATTTTCAAAT AGACTGTGGC ATGTGGTGGA TTACCTGCAA
ATGGTTTTAA ATAATCTCAA TGAAGGTGTA TTTATTCTCT CGAGTGATGG AGAAGTCCTT
TATCAAAATA ATGCACTAGC CGGTATTCTA GCAACTCAGT CCGCTCAATC TACTCAGCCC
GAGATTCCAA GGGAATTATT ACAAAAAATC CAATCCGGAA GTGGAGGAGA TTTCGTATAC
CATCTGAATA ACAAAGTTTA TTCAGTTAAT GTAGCACCTT TTCCATGTAA TGAGTCCGAA
GAAAATAAAT TAGTCACAAT CAAGAATGTT ACTCACATAA CGGAACTCCA AGAACAACTA
AGCCGAGCCA ATAGTAAACT AAACTATCTG GAAAATACAG TCAGTAAAAT TTCTCAAGAG
CATTATACTT TTGGTAACAT TTTTTCTGTT AGTCCAAAAA TGGAACATGT AATTGAACTG
GCAAAACAGG TAGCACCAAC TAAAGCCACA GTCCTCATAA ATGGTGAAAG CGGAACAGGA
AAAGAATTAC TGGCAAATGC CATTCATCAA CACAGTGATA GAAAAGACGC TCCATTGATC
ACTATTAACT GCGGTGCTAT CCCTGAAAAT TTAGCTGAAA GTGAGTTCTT CGGATATTGT
TCGGGGGCTT TCACAGGGGC AAAAAAAGAA GGTAAACCAG GGGCTTTTGA AATAGCGGAT
GGAGGGACTT TATTTCTCGA TGAAATAGGT GATCTCCCTC TTAATATGCA AGCAAAATTA
CTAAGAGCAC TACAAGAAGG TTCCTTTTAC AGAGTAGGAG GGATAGAACC TGTCAGTGTC
GATGTCAGAA TTATAGCAGC TACTAACCAA AACCTAGAAG AACTGGTTCA GAATAATCAG
TTTAGAGAAG ACTTATATTA TCGAATCAAT GTAGCGAATT TAGAACTTCC ACCGCTAAGA
GAAAAAACCG AAGACATTAT GCCCCTAACT AAAAGATTTA TAGATCATTT TTCCCAGGTT
CACGGAATTG AGATTACAGA AATCGAACAA GCTGTTATGG ATACTCTAGA GGAATATCAC
TGGCCCGGTA ATGTAAGGGA ATTAAAAAAT GTAATAGAAA GACTTGTGAT CTTTTCAACA
CAAGGCAAAA TCAGTATCAA AGCGCTCCCC TCTTATCTAC ATCCAGGGCC AAAATTTGGC
AGTCAAGATC AACAACAGTT ACATGAACAG CTACACAGAC AGCATTCACA GGATGATAAT
TTCAGTAATA AAAGTAATTC AGAAAGTAAA ATTGATGAGC TTGAACGAAA AACCATTCTT
GATTCCCTAA AGAAACATTC TTTCAACAAA GCTAAAGTTG CCCGTGAATT AAATATTCCC
CGGAGTACAC TTTATTATCG CATGAAAGTT TTAAATATAA ATTAA
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| Protein sequence | MDFSNLTVLT AGDAVIKDIS IVSPSATVKE LNEIMLLKKK EEVLVMENQA IVGVITKNDL
VKNLATGIKW DTEVKYIMTR NVIRFKDHED LTGVRDNMRF HGIKRAPVLN ENEECLGLIT
VKSICDAFSN RLWHVVDYLQ MVLNNLNEGV FILSSDGEVL YQNNALAGIL ATQSAQSTQP
EIPRELLQKI QSGSGGDFVY HLNNKVYSVN VAPFPCNESE ENKLVTIKNV THITELQEQL
SRANSKLNYL ENTVSKISQE HYTFGNIFSV SPKMEHVIEL AKQVAPTKAT VLINGESGTG
KELLANAIHQ HSDRKDAPLI TINCGAIPEN LAESEFFGYC SGAFTGAKKE GKPGAFEIAD
GGTLFLDEIG DLPLNMQAKL LRALQEGSFY RVGGIEPVSV DVRIIAATNQ NLEELVQNNQ
FREDLYYRIN VANLELPPLR EKTEDIMPLT KRFIDHFSQV HGIEITEIEQ AVMDTLEEYH
WPGNVRELKN VIERLVIFST QGKISIKALP SYLHPGPKFG SQDQQQLHEQ LHRQHSQDDN
FSNKSNSESK IDELERKTIL DSLKKHSFNK AKVARELNIP RSTLYYRMKV LNIN
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