Gene Nther_2178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_2178 
Symbol 
ID6317204 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp2303925 
End bp2304278 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content40% 
IMG OID642644565 
Productalkylhydroperoxidase like protein, AhpD family 
Protein accessionYP_001918332 
Protein GI188586787 
COG category[S] Function unknown 
COG ID[COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 
TIGRFAM ID[TIGR00778] alkylhydroperoxidase AhpD family core domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000000783696 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value5.56678e-19 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACGATC CGAAACAATT ATTAAACGAA TTTATGGAAG GTCTTCAAAG TTTTGAAGAT 
GAGGCACCTG AACAAACTCA GGCATTTATG AACCTATTAG GAGCTTCCTA CAAAGATGAA
GCTTTATCAA ACAAGACAAA GGAATTAATC AGTGTGGCCA TCGGTGCTTA TAACCGCTGT
GAATACTGCA TCGCTTTCCA CGTTTATAAA GCCCTTGAAG CTGGAGCCAC AAAGGAAGAG
ATTTATGAAT CAGCTATGGT TTCTGTTGCT TTCGGTGGTG GACCATCCAT GGCTTACTCC
GTCACTTTGG TCAAGAAATC AGTAGAAGCA TTTTTACCTG AATTTCAAAG CTAA
 
Protein sequence
MNDPKQLLNE FMEGLQSFED EAPEQTQAFM NLLGASYKDE ALSNKTKELI SVAIGAYNRC 
EYCIAFHVYK ALEAGATKEE IYESAMVSVA FGGGPSMAYS VTLVKKSVEA FLPEFQS