Gene Nther_2169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_2169 
Symbol 
ID6315212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp2295443 
End bp2295979 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content35% 
IMG OID642644556 
Producthypothetical protein 
Protein accessionYP_001918323 
Protein GI188586778 
COG category[S] Function unknown 
COG ID[COG5423] Predicted metal-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.000000170333 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATGATC AACATGTGGA AGACTTAATA AACAAATATG GGTTTCAAGA TTATAAGTGG 
ATAGACTCTA AGGAAATAGT CGTCAAGCAA TGGGTTCGTT TTAAATGTTT ATTTATGTGT
GATACTTATG GCACAAAAGC AGTGTGTCCG CCTAATATGC CCACAGTCCA AGAATGTGAA
AAGTTTTTTT CTGAATACTC CAAAGCGGTA ATTTTACGTA TTCAAGTCCC AGCTTATCAC
GGAGATAAAG ATTCTGAAGT ATTCAGAGAA ATTGATAAGA ACTTAATAGA ACTGGAAAAA
GAAATATTTT ATGCAGGTTA TTATAAAGTC ATGGCTTTTT TAGCAACTAT CTGTTATCAA
TGTCAAGATT GTCCCAGGGA AATGACTGAT TGTGTTTATA AACAGTGGTC TCGTCCTACA
CCAGAGGCTT TGGGAGTAGA CGTGTTTGAA ACAGTTAAAA AAGTTGGCTA TCCAATAGAA
GTGCTGTCAA ATTATCAGCA GCAAATGAAT AGATACGCTA TCATAATGAT TGAATGA
 
Protein sequence
MNDQHVEDLI NKYGFQDYKW IDSKEIVVKQ WVRFKCLFMC DTYGTKAVCP PNMPTVQECE 
KFFSEYSKAV ILRIQVPAYH GDKDSEVFRE IDKNLIELEK EIFYAGYYKV MAFLATICYQ
CQDCPREMTD CVYKQWSRPT PEALGVDVFE TVKKVGYPIE VLSNYQQQMN RYAIIMIE