Gene Nther_2163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_2163 
Symbol 
ID6316027 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp2290755 
End bp2292134 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content38% 
IMG OID642644550 
ProductNa+/solute symporter 
Protein accessionYP_001918317 
Protein GI188586772 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG0591] Na+/proline symporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.000233045 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTGTCCA TAACTCATAT AGTTAGTATT TTGTTTACTT TGATTTTAGT TACAGCAGTT 
GGCATATACT CTGCTTCTAG GGTAAACAGC GCCAGCGATT TTTCTGTAGG AGGGAGATCA
ATAAGTGCAT CCTTAATAAT TGGTACAATT GTTGGAACTT TAGTAGGAGG AGCGGCTACC
ATTGGAACAG CTCAACTAGC CTTCACCGAT GGTTTTAGTG CCTGGTGGTT TACTCTAGGG
GGTGGATTGA CCTGTATTTT TATGGGAACT TTTTTAGCAA AACCATTAAG ACAAGCAGAA
GTAGATACAA TTCCAGGCTT TTTGGCTTCC TTTTATGGAC AAAAGGCCAG ACCTATAGCC
AGTACATTTT CCTCCATGGG AATATTTTTA AATGTAGTTG GACAAACCCT GGCAGCTGTG
GCTTTAATCA CTTCTATGGT CAATATTAGT TCCATGTTAG CTGCAATAAT TGCGGTGTTT
TTAATAATCG TATATGTTAT CTTCGGAGGA GTTTGGGGAA CTGGTCTAGT TGGAAGGCTA
AAAGTAATTT TATTGTATAT TTCACTAGTA GCAGCCGGTT TAGCTGCTTT TTATTATATT
GGCGGCACAG TTGGAATTGC AGAAAATTTC CATCCATTAG AAATGAATAG AGAATGGTAC
AGTTTATTTA ATAGAGGTAT CAATACCGAC TTGGCTGCAG GATTTTCCAT GTTTGTGGGG
GTTTTATCTA CCCAAACCTA TTTACAGGCA GTCTTCTCAG GAAAAAATAT CGCAACTTCT
ATTAAAGGGT CAGTTATTTC AGGAATCATT ATTCCGCCCA TCGGTTTACT TGCTATGTTG
GTAGGTCTTT TTATGAGGGT TTCTCACCCC ACCATAGAGC CCAGAAGTGC ATTACCTTTA
TTTGTGATCA ATTATCTTCC TGATTGGATA GGCGGAATTG TCCTGGCCAC CCTGTTAATT
TCTATTATTG GAACAGGTGC AGGTCTAATT CTGGGTATTA GCACAATGCT AAGCCAAGAT
CTATACAAAA AATTAATTAA TCCTTCTGCA TCCCAGAAAA AAGTGTTACT ATTTACCAGG
TCAGCTATTA TTTTATTCAG TACTTTAACT CTTTTGTTTG TTACCGGAAA TTTACAATCA
TTGATTCTTA ACTGGAGCTT CTTATCTATG GGATTAAGAG GTGCTACTAT CTGTATCCCA
TTATTAGGAG CTATCTTTTT AAAAGATTAT ATTAATCCTA AGGCCGGCCT TGTAGCTTTA
TTCCTGGCTC CTTTGATTAC TATTATTTGG GCAATCATGC CCCAGGCTAC AATAGACCCT
CTTTACATCG GGTTGGGAGT AAGTCTTCTT ACAGTGTTGT TTGGCTCAAT ATTTAAATAA
 
Protein sequence
MLSITHIVSI LFTLILVTAV GIYSASRVNS ASDFSVGGRS ISASLIIGTI VGTLVGGAAT 
IGTAQLAFTD GFSAWWFTLG GGLTCIFMGT FLAKPLRQAE VDTIPGFLAS FYGQKARPIA
STFSSMGIFL NVVGQTLAAV ALITSMVNIS SMLAAIIAVF LIIVYVIFGG VWGTGLVGRL
KVILLYISLV AAGLAAFYYI GGTVGIAENF HPLEMNREWY SLFNRGINTD LAAGFSMFVG
VLSTQTYLQA VFSGKNIATS IKGSVISGII IPPIGLLAML VGLFMRVSHP TIEPRSALPL
FVINYLPDWI GGIVLATLLI SIIGTGAGLI LGISTMLSQD LYKKLINPSA SQKKVLLFTR
SAIILFSTLT LLFVTGNLQS LILNWSFLSM GLRGATICIP LLGAIFLKDY INPKAGLVAL
FLAPLITIIW AIMPQATIDP LYIGLGVSLL TVLFGSIFK