Gene Nther_2139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_2139 
Symbol 
ID6314798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp2260956 
End bp2262326 
Gene Length1371 bp 
Protein Length456 aa 
Translation table11 
GC content37% 
IMG OID642644526 
ProductDeoxyribodipyrimidine photo-lyase 
Protein accessionYP_001918293 
Protein GI188586748 
COG category[L] Replication, recombination and repair 
COG ID[COG0415] Deoxyribodipyrimidine photolyase 
TIGRFAM ID[TIGR00591] photolyase PhrII 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCATA AAGAAAGAAT AGAAATCCTC CAAGAAGTAC AAACACCAGC TCAAGAAGGA 
AAATACGTAC TCTACTGGAT GCAAAAAGCA CAACGAACTC ATTACAATCA TGCACTTGAA
TATGCTATCG AACAGGCCAA CAAGCTCAAC TTACCCCTGA TCGTTTATTT TGGCTTGTAC
GAACAATTTC CTTATGCTAG TTCAAGACAT TTTCAGTTCA TGCTTCAAGG ATTACAGGAT
GTCGCCGAAA ACTTGGCGAA AAGAAATATC AAAATGATTA TAAAGAGAAC TTTTCCTCCT
TATGGGGCAA TTGAATTAGC AAAAGATGCT TCTATGATTG TAGTTGACAA GGGGTATCTT
AAATTTGAAA AGGACTGGAA AGAAATACTC TCACATCAGT TAAGCTGTCC TATTCACCAA
ATTGAAACCG ACGCCGTTAT ACCGGTGAAT ACAGCCTCTT CGAAAGAAGA GTATGCTGCC
TATACATTGC GAAAAAAGCT CTTAAAAATG CTTGACATTT TCCTCACTCC TTTGATTTCA
AGGAATCCAA ATTTTAATTC CTTTGAGATA ACAAATCTAG AACAATATAA TGATATAGAT
ATTTATACTA AAAGTGCTTC CGAAATTCTA GAGGAATTAG ACATCCATCG AGAAGTACAA
CCCGTAACAG ATATTAAAGG AGGAGAAAAT CAAGCTCTAG AACAATTATC CGGGTTTTTG
AACCAAGGAA AAGGTTTGGA GCTCTATATT CAAAAAAAGA ATGACCCTAG TGTTCAGGCC
ACTTCAAAAT TAAGCCCTTA TTTACATTTT GGCCAAATTT CACCTTTATT TATCGCACTA
GAAGTACTTA AATTTACCCA AGATTATAAT CATGAATTTC TAGAACAATT AATAGTCAGA
AGAGAGTTGA GCCTTAACCT GATTGAGAAA AATATTAATT ATCTTACTTT ATCACCACTG
CCTCAGTGGT CTATAAAAAC TCTAAATGAA CACCGCAATG ACCCGCGAAA TAACTTTTAT
ACCTTAGAAG AAATAGAAGC CGCTAACACA CATGATAAAT ACTTTAATGC AGCCCAAAAA
GAACTTATGT CCAGGGGAAC AATTCATAAT TATATCCGTA TGTACTGGGG GAAAAAGATC
ATAGAGTGGT CCCAAACGCC AGAAGAAGCT CATAATACCC TCTGTCACTT GAATGACAAA
TATGCCCTAG ACGGTCGTGA TCCCAATGGT TACGCCAATA TATTATGGTG TTTTGGCAAA
CACGACCGAC CATTCCAAGA GAGGCAAATT TTTGGGAAAG TAAGGTATAT GGGAGTTAAT
GCATTAAAGA GAAATGGCAA ACCTGACCAA TATGTGGCTA CTTGGGTCTA G
 
Protein sequence
MIHKERIEIL QEVQTPAQEG KYVLYWMQKA QRTHYNHALE YAIEQANKLN LPLIVYFGLY 
EQFPYASSRH FQFMLQGLQD VAENLAKRNI KMIIKRTFPP YGAIELAKDA SMIVVDKGYL
KFEKDWKEIL SHQLSCPIHQ IETDAVIPVN TASSKEEYAA YTLRKKLLKM LDIFLTPLIS
RNPNFNSFEI TNLEQYNDID IYTKSASEIL EELDIHREVQ PVTDIKGGEN QALEQLSGFL
NQGKGLELYI QKKNDPSVQA TSKLSPYLHF GQISPLFIAL EVLKFTQDYN HEFLEQLIVR
RELSLNLIEK NINYLTLSPL PQWSIKTLNE HRNDPRNNFY TLEEIEAANT HDKYFNAAQK
ELMSRGTIHN YIRMYWGKKI IEWSQTPEEA HNTLCHLNDK YALDGRDPNG YANILWCFGK
HDRPFQERQI FGKVRYMGVN ALKRNGKPDQ YVATWV