Gene Nther_2120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_2120 
Symbol 
ID6315822 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp2241472 
End bp2242980 
Gene Length1509 bp 
Protein Length502 aa 
Translation table11 
GC content38% 
IMG OID642644508 
Productcopper amine oxidase domain protein 
Protein accessionYP_001918275 
Protein GI188586730 
COG category[R] General function prediction only 
COG ID[COG2333] Predicted hydrolase (metallo-beta-lactamase superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAAAAA TCATCTGCTT TGGATTATGT ATGGTATTAG TTTTCTCATT AAATTCTTTA 
TGTTTTGCTG AAGAAACCAA GGTTATAGTC GATGGAGAAG AGATTGACTT ACAAGATCCC
GTGAGAATTA TTGAGGGAAG GACACTATTA CCTGCTAGAC CTTTATTTGA AAGTTTAGAT
GCAGAGATGA ATTGGAACCC TAAAACCGAA ACAGCCATTG GTAAGATGAA TGGTCATCAG
GTTGAAATTC CCCTCAATGA AGAACAGGCT AAAATCAATG ATGAGCCCCG CAATTTGGAA
GTACAAGCTG AAACCTATGA GGGAAGAACT TACATACCAC TACGATTTGC AGGAGAGGCT
TTGGGTGGAA CTGTCGAATG GGATAGCAAA AAAAACGCAG CAATTATCAC AACTGATGCA
GTAGAACCAG ATCCGGCTAA AAAAGAAACA AGCCCAGAAA AAACTGAGCC AGGACAGTTA
ACAGCTCATT TTATAGATGT AGGCCAGGGA GATGCCATAT TTTTAGAAGC TCCTTGTGAT
AGTCACATTT TAGTCGATGG TGGCTTAGAA CTAGAAAGTC AACCTGTAGT TAATTATCTA
GAGGAACTTG GAATAAATAA AATTGAAAAA GTAGTAGCAA CTCATCCCCA TCAAGATCAT
ATTGGTGGGC TGATTGATGT TTATCAAAAC TTCGATGTTA AAACCACTTA TGATAGCGGT
TATGAACATG ATACCCTCAC TTATGAAAAA TATTACGAAA TAGCAAATGA TGTTTCTAAC
TTTAAAACTG CTAGACAAGG AGACAAACTG GAAATTGACT CCTTGGGGGC CGAATTTATT
CATCCACCCC AGGGACATAC AGGTGAAGTT CACGATTTGA ACCTTGTTTT AGAGGTTGAA
TTTAAAAATC AATCCCTTTT ACTAACAGGT GATGCTGAAA AAGATACAGA GCAGATGATA
ATAGAAAGAG CCAGTGACAT TTCTAGTGAA ATTTTAAAAA TCGGTCACCA CGGCAGTTAT
ACTAGCAGCA GTGAAGAGTT TTTAGAAGCA GTTGATCCTG AAGCAGCGGT AATTCAAGTT
GGAGAAGACA ATCAGTACGG TCATCCTCAT GACCAAGTCC TAGAAAGGTT AGCTGAACAA
AATATAGAAA TTTATAGAAC TGATTATCAT GATGACATAG TAATGGAACT AGACGAAAAC
ACTTGGCAAG CTGAAGTTGA ACCTTGGAAA AAAGAAGATG GAGAACTCCC AACAGATCAA
GACGCAGATG ATAAAGACAC AGTTACTGAG GAAAAAGACG ATCAGGATCA AGAACTGATT
AATATAAATC AAGCCGAGAA AGAAGAATTA ACTCAGATCA TTAATATCGA TGTGGACAGG
GCAGAACAAA TTGTAGAGTT ACGAAAAGAA CGACCTTTTA CTTCCCTAGA TGACCTGGAA
CGTGTTAAAG GGCTAGCCGA AGTAACCATT GGAGAAATAA AGGATGAAGG AATAGCTTAC
GTCGATTAA
 
Protein sequence
MKKIICFGLC MVLVFSLNSL CFAEETKVIV DGEEIDLQDP VRIIEGRTLL PARPLFESLD 
AEMNWNPKTE TAIGKMNGHQ VEIPLNEEQA KINDEPRNLE VQAETYEGRT YIPLRFAGEA
LGGTVEWDSK KNAAIITTDA VEPDPAKKET SPEKTEPGQL TAHFIDVGQG DAIFLEAPCD
SHILVDGGLE LESQPVVNYL EELGINKIEK VVATHPHQDH IGGLIDVYQN FDVKTTYDSG
YEHDTLTYEK YYEIANDVSN FKTARQGDKL EIDSLGAEFI HPPQGHTGEV HDLNLVLEVE
FKNQSLLLTG DAEKDTEQMI IERASDISSE ILKIGHHGSY TSSSEEFLEA VDPEAAVIQV
GEDNQYGHPH DQVLERLAEQ NIEIYRTDYH DDIVMELDEN TWQAEVEPWK KEDGELPTDQ
DADDKDTVTE EKDDQDQELI NINQAEKEEL TQIINIDVDR AEQIVELRKE RPFTSLDDLE
RVKGLAEVTI GEIKDEGIAY VD