| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_2110 |
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| Symbol | |
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| ID | 6315812 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010718 |
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| Strand | - |
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| Start bp | 2226197 |
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| End bp | 2228641 |
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| Gene Length | 2445 bp |
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| Protein Length | 814 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 642644498 |
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| Product | diguanylate cyclase and metal dependent phosphohydrolase |
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| Protein accession | YP_001918265 |
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| Protein GI | 188586720 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.406671 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 0.904687 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCGATT ATAAAATAGA TAAGTCGCTT GAAGTAGGAG AATTAAAAAT AGAAGAAATC
ATTGATATAG AAGAAATCAA ACCCATAATG GATGAGTTTT ATCAAAACAC GAAAATTAGC
GCAGCTTTAA TGGACCTGGA GGGGAACATT TTAGTTTCTA CATATTGGCA AGATATTTGT
GAAAATTATC ATAGAAAACA TTCCGAAACC CGGAAAAATT GCATACAAAG CGATCTTAAC
TTTTCCAAGG GTGCTGAGAG TGGCAGCTAT GTAGCTTATA AATGTAAAAA TAATTTGCGC
GATGTGGCAA TACCTATTCA TATAGAAGGA GAACAAATAG GTATTGTATT TGTGGGTCAA
TTTTTTTATG AAGATGATGA GATAGATTTA GTATATTTTA CAAATCAAGC TGAAAAGTAT
GGCTTTGATA AAGGCAAGTA CTTGCAAGCT CTTAAAAATG TTCCTAAAGT TAATAAGCTG
AAATTACAAT CAATTATAAA CTTTTATACC AAACTAGCCC ATTTGATTTC TACTCTGGGT
CATAAGAATG TCAAGCTTCA AAGGAATCTA AAAGCTCAGA ACAATGTAAA ACAAGCTCTT
AGAAAAAGTG AGGAAAATTT AGCAGCAACC TTACATTCCA TTGGAGATGG TGTAATTGTT
ACAGATAAAC AGGGTTTGAT AACCAGGATG AATCCAGTGG CAGAACAGTT GACGGGTTGG
CCTATGAAAC AGGCTAAGGA TAAACAGTTA GAAATTGTGT TTTACGTTGT GGACCAGGCC
GGAGAGAAAA TTTTGGATCC GGTTAAGCAA GTTATTCTCA ATGGTGAAAT TGTTGACTTG
GGGAATAACT ATGCAACTCT GATTTCTCGC CATGGAAATA GAAGACAGAT TTCAGAAAGT
GCTGCTCCAA TTTATAATCA AGAAGGGGAA ATTATGGGAG TAGTAATTGT TTTTTCAGAT
GTTACAGAAC AATACAAGAT TCGCGAAGAC CTAAAAAAAT CTGAACAGCT ATTGCAATCG
ACCCTTGATT CACTAAGTGC CCACATTTGT GTTCTTGATG AAGAAGGCGT TATACGTATT
GTCAATAAAT CATGGATGGA TTTTGGTCGT GGAAATAATG CCCCTCTAGA TTTGATAAGT
CCAGGCGTCA ATTACCTAGA AGTATGTGAA AGAGCTGAAG GTGATGGTGC CGAATTTGCG
TGGGAATTTC TAAATGGTAT TTACGACGTC AAAAAAGGTG AATTAAATTA TTTTGAGTTG
GAATATCCTT GTCATTCTCC CACAAAAAAC AGATGGTTTA TTGGCCGGGT AACTCCTCAT
CAAGGATACT TTAATAACTC AAGTGATACT GGGATTGTAA TTGCCCATGA AGATATAACT
GCAAGAAAGC AAGCAGAAGA GAGAATAAAG TATTTAAGTT TTCATGATAG CCTGACAAGT
CTTTATAATA GGGCTTATTT GGAAGAGCAA ATCAAGAAGT TAGATGTTGA AGGACAGTTA
CCGATTAGTT TGATACTGGC AGATTTAAAT GGACTAAAAT TGGTGAATGA CAGTTACGGA
CATGAATGTG GGGATCAATT ACTTCTTCAA ACTTCAAAAA TATTAACGCA ATCCTGCAGA
AAAGATGATA TTATTGCCAG ATGGGGTGGA GATGAATTTG TCATTTTACT GACAAAGACA
AATAAGGAAG ATGCAGAGAA AATATGTAAT CGGATAAAAA ATCTCTGTAT AACAACTAAA
CAAGAAGAAA TCCCAGTTTC TATAACCTTG GGAGTGTCTA CCAAAGAAAA TAGTGAAGAG
GATATATATA ATGTATTGAT TGCTGCAGAA GAAGAAATGT ATAAGAATAA ATTAGTTGAA
AGCCGAAGTG CCAAGAGCAA TATTTTAAAG GCTTTACTAA ATACTCTGGG GGCTAAAAGT
TTTGAAACGG AAGAACACGC TAGACGAATG CAAGAAATGG CATATAAAAT AGGTGTTAAA
ATAGAATTAA CTGAATCTGA ACTGGATCGC CTGGTGTTAC TAGTTTCAAT GCATGATATT
GGAAAAATTA CCATACCCGA AGAAATTTTA ACTAAACCAG AAAACTTGAC TAAAAATGAA
TGGGAATTAG TAAAGAAACA TCCAGAAACA GGGTATTGGA TTGCTCGGTC AACTGAAGAG
TTTTCTCATA TAGCAGAAGA TATTTTGTAT CATCATGAAA AGTGGGACGG AACGGGCTAT
CCTCAAGGAT TAGAAGGTGA AAAAATTCCT TTATTAGCAA GGATAACTGC TATAGTTGAT
TCATATGATG TAATGATCTA TGGCAGACCC TATAAGGAAG CCGTTCCACC TGAACAAGCA
TTAAGGGAAA TTAAAGACAA TGCAAGAACT CAATTTGATC CAGAATTAGT TGATATTTTT
ATGGGTGTTT TAGAAGAAGA CTACGGTATT TTTGAAGTTC AGTAA
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| Protein sequence | MSDYKIDKSL EVGELKIEEI IDIEEIKPIM DEFYQNTKIS AALMDLEGNI LVSTYWQDIC
ENYHRKHSET RKNCIQSDLN FSKGAESGSY VAYKCKNNLR DVAIPIHIEG EQIGIVFVGQ
FFYEDDEIDL VYFTNQAEKY GFDKGKYLQA LKNVPKVNKL KLQSIINFYT KLAHLISTLG
HKNVKLQRNL KAQNNVKQAL RKSEENLAAT LHSIGDGVIV TDKQGLITRM NPVAEQLTGW
PMKQAKDKQL EIVFYVVDQA GEKILDPVKQ VILNGEIVDL GNNYATLISR HGNRRQISES
AAPIYNQEGE IMGVVIVFSD VTEQYKIRED LKKSEQLLQS TLDSLSAHIC VLDEEGVIRI
VNKSWMDFGR GNNAPLDLIS PGVNYLEVCE RAEGDGAEFA WEFLNGIYDV KKGELNYFEL
EYPCHSPTKN RWFIGRVTPH QGYFNNSSDT GIVIAHEDIT ARKQAEERIK YLSFHDSLTS
LYNRAYLEEQ IKKLDVEGQL PISLILADLN GLKLVNDSYG HECGDQLLLQ TSKILTQSCR
KDDIIARWGG DEFVILLTKT NKEDAEKICN RIKNLCITTK QEEIPVSITL GVSTKENSEE
DIYNVLIAAE EEMYKNKLVE SRSAKSNILK ALLNTLGAKS FETEEHARRM QEMAYKIGVK
IELTESELDR LVLLVSMHDI GKITIPEEIL TKPENLTKNE WELVKKHPET GYWIARSTEE
FSHIAEDILY HHEKWDGTGY PQGLEGEKIP LLARITAIVD SYDVMIYGRP YKEAVPPEQA
LREIKDNART QFDPELVDIF MGVLEEDYGI FEVQ
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