Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nther_2083 |
Symbol | |
ID | 6316078 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
Kingdom | Bacteria |
Replicon accession | NC_010718 |
Strand | - |
Start bp | 2203189 |
End bp | 2205582 |
Gene Length | 2394 bp |
Protein Length | 797 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 642644471 |
Product | protein of unknown function DUF214 |
Protein accession | YP_001918238 |
Protein GI | 188586693 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTATGGT TAAAAATGCT TCGCGACATT TGGAGTAACA AAGGGTCGTA TATAGCCTGC TTAGTTATTG TGCTTCTGGG TTTGATTGTA TTCACATCCT TTTCCATTGT GAGTGATAAT CTAGTCTTGT CTAAAGACAA TTTTTATAGT AATCAAAATT TCGCCCACGG TTTTGCTGAA TTTCAATCAA TACCAAAATC CCGGGTCGAT TCCCTGTCCC AAATTGAAGG AATTAGACAA ATAGATGGTA GACTAGTTAA AGATGTCAGG GTGTATGATT CCCAACGGGA TGAATCCGTT TATTTGCGTC TGGTATCTCT GGATTTAGAT AATCCCAATA GGTTAAATAA TGTTAAAAAA CTGGGAGGTA ATCAACTACA AGCAGGACAA TTACAGGCTT GGATTGATAA TCAGTTTTAC GATGCCAATC AATTGCAATT GGGTGACACC TTAGAGGTTA TAGCTGAAGG TAGGGTTCAG GAACTAACTA TACAGGGAAA AGGTATGAGT CCAGAATTCA CTTATCCTCT CAGGACTGAA ACAGAATTAT TCCCCAATCC AGAACAGTTT GGAATTGCCT TTTTACCTTA TGAAGATATG TCCACATTGT TTCCTGATCA GGAAAACAGG GTTAATAATC TAGTTTTTAC TATAAATCCT AAATTTAAAT TTTCAGAAGT AGAAAATTTA TTGGAGCCAG AACTTGATCA ATATGGCTTA CAGACTATTT ATTCAAGGGA AAATCAAACT AGTCATTTGA TTTTGTCTGA AGAAGTGGCT ATGTTAGAAC GAGTTTCTCG AGCTCTTCCC TTGACCTTTC TGAGTATAGC TGGAATTATA CTTTTTATTA TGTTAAAACG ATTGATTGAA CAACAGCGTG GGCAAATAGG TATTTTGAAG GCCTTTGGTT ATACCGACAG GGAAATAGTT ATTCATTATC TATCTTATTC GATATTAATT GGCGCAGTGG GCGGACTAGC CGGGAGCATC ATTGGGATGT TTTTAGCAAC TCCTTTAACC GAATTATTAT TGGAGTTCTT CAATGTTCCC AGGTTTTATG AGGGTTTTTC CATGTACTAT CTCATTTTAG GCCTGGCTTT ATCCCTTTCC GTATTCGTTG TAGCAGGGTA TTTAGGGTGC AGGCCGGCTA TGGATTTAAA GCCTGCCGAA GCCATGAAAC CCCCAGCGCC ACCATCCGGG AAAAAGGTCA TATTAGAAAA AATTGATTTA ATTTGGAAAA TGTTTACAAT TCAAGGAAAA ATGGCAATTC GAAATATTTT TAGAAACAGG GGTAGAAGTA TTTTTCTCTT TGTTGGAATT ACCCTGAGTT GTGCTGTTGT AGCTTTGACA TGGTCATTAA ATGAACTTAT TGACCTTTTG ATTTTTTATC AACACGAAGA GGTTGAAACT TATGATGCCC GGGTGAATTT GTCCAATCCC GTAGAAATAG ATGTGGGTCG ACGTGAATTA GAAAGTAACT CTGTAGTTGA GCATGTAGAA CCTCTGAATG AAATTCCCAT TACTCTATCT CATCTAGGGA ATTCGGAAGA TATCGCCCTT TTGGGGATAA CTGGAACTAG TGATATGTAT ACCATTTTAG ATTCTGACGA AAATCAAATA GATCTGGAAA AGACCCAAGG AATCATTTTA TCTGAAAGAC TAGCCGAGAA ATTAAATGTA ACACAGGGGG ATAGTCTGGA ATTTGAGAGC CCCTATTTGA GAAATGGAGA CAATTCAAGG CCAGTAGAAG TTGACAAAAC AGTACCTCAA TACTTAGGTA TGAACGCCTA TATGGAAGTA GGCAATCTAG CGGGACTGTT GGATCAGGGG AATATTACTA CATCTTATAT GGTGAACTTG AATGATAAGA ATGGTGAAAC ACTTTTGGAA AATCTCTCTC TATTAAAAGA GCGTTATCGA GAAAGTGATG TGGTTTCAGG TATAGATGGA CGTCATGAAA GGATAGAACA GTCCGAAGAA CTTATGGAAA CCTTTGGTAG TTTAATTTAT ATATACGTAT TATTTGGTGT GATCCTTTGC TTTGCAATAA TTTACAGTTC AAGTTTTATA ATTTTATCGG AACGAAGTCG AGAACTGGCT TCTATGCGTG TCTTAGGCAT GACATCCAGG GAAGTTTTTA CAGTGATCAC TTTTGAACAG TGGTTTATCA GTATATTTGC TATAATAACG GCTGTACCTT TGGCTCAGCT AATGCAGTGG GGCATGGCTC GAAATTTTAG TACAGACTTT TATGTTCTAC CTGGTGAAAT GTCAACTACA GCTCTAATTG CAGGTGTGAT CATTACGGTA TTTTCTATAT GGACAGCTCA GAGATTTGCC TTGAGGAAGG TGAGAAATCT GAGTTTAGTA GATGTGTTGA AATCCAGAGA GTGA
|
Protein sequence | MLWLKMLRDI WSNKGSYIAC LVIVLLGLIV FTSFSIVSDN LVLSKDNFYS NQNFAHGFAE FQSIPKSRVD SLSQIEGIRQ IDGRLVKDVR VYDSQRDESV YLRLVSLDLD NPNRLNNVKK LGGNQLQAGQ LQAWIDNQFY DANQLQLGDT LEVIAEGRVQ ELTIQGKGMS PEFTYPLRTE TELFPNPEQF GIAFLPYEDM STLFPDQENR VNNLVFTINP KFKFSEVENL LEPELDQYGL QTIYSRENQT SHLILSEEVA MLERVSRALP LTFLSIAGII LFIMLKRLIE QQRGQIGILK AFGYTDREIV IHYLSYSILI GAVGGLAGSI IGMFLATPLT ELLLEFFNVP RFYEGFSMYY LILGLALSLS VFVVAGYLGC RPAMDLKPAE AMKPPAPPSG KKVILEKIDL IWKMFTIQGK MAIRNIFRNR GRSIFLFVGI TLSCAVVALT WSLNELIDLL IFYQHEEVET YDARVNLSNP VEIDVGRREL ESNSVVEHVE PLNEIPITLS HLGNSEDIAL LGITGTSDMY TILDSDENQI DLEKTQGIIL SERLAEKLNV TQGDSLEFES PYLRNGDNSR PVEVDKTVPQ YLGMNAYMEV GNLAGLLDQG NITTSYMVNL NDKNGETLLE NLSLLKERYR ESDVVSGIDG RHERIEQSEE LMETFGSLIY IYVLFGVILC FAIIYSSSFI ILSERSRELA SMRVLGMTSR EVFTVITFEQ WFISIFAIIT AVPLAQLMQW GMARNFSTDF YVLPGEMSTT ALIAGVIITV FSIWTAQRFA LRKVRNLSLV DVLKSRE
|
| |