Gene Nther_2080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_2080 
Symbol 
ID6316075 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp2199751 
End bp2200863 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content38% 
IMG OID642644468 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001918235 
Protein GI188586690 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTTGA TTAAGAAGTT AATCACTAAA TTGAGGCCAA AGGGGATTTT ATGGGAATTT 
TTTCAGCGGC AATTAGTGGG TGCCCTGGCG GCAGGTTTAA TTATATTTTT TTGTATTTAT
TTAATATGGC CGGGAGATAT GGATCTTGAG ATTGCTACTG CCATTGTATT GGGTTCGCCA
GTAGTAGTTT TTCTTAGTTC TTGGGTATCT TGGTATAAAT ATCTCAGAAA TTTAAAACAA
TCAATTAACT ATATGGGCAG ATATATATTG GAACTAAAAC GAGGCAATCT TAATAATCGC
CTTGATATTC ACAGGGACGA TGAGATTCAG GATTTAGGTG AACGCTTGGA AGAGTTAACC
AAAGATTATA AGCAACAAGT TAGGGCTAGT CAAAAAAAGA TTAATGAAAA TAAAGATTTA
ATTGCCCGGG CGGAAGAAGC TGCTAGCTTA GAAGAAAGGC GTAAATTGGC TAGAGAACTG
CATGATGCTG TCAGTCAGCA GCTTTTTGCA GCTTCTATGT CAATGAAAGC CATGGATAAA
ATGATTTATC AGGATCCTGA TAAGGCAAGA CAGCTATTTT CGAAAACTAC TTCCATGATC
CAAAATGCCC AACAGGAACT ACGGGCTTTA ATATTACATT TGAGACCTGT TACATTAGAA
GGCAAAAGCC TATCTGAAGG TTTGGAACAG TTGCTGCAAG AGATTAAGGA TAAACACAAA
AACTTTAATA TTTCCTGGGA AATCACTCAA CTTCCAGAAC TTGCTTCTGG GGTGGAAGAC
CAGGTATTTC GAGTGATTCA GGAAGCCATC TCCAATATGC TCCGTCACTC ACAAGCTAAA
AATTTTATTG TGAATGGAAA ATATAAAGGG AATCGGATTT ATATTTCTTT GGAAGATGAT
GGTGTAGGTT TTAATTTAAG CCAGGCTTTG AACAAGCAGT CTTCTTCCTA TGGTTTGAAA
ACCATGAAGG AACGTATGGT TGAGTTAGGG GGACATCTAA ACATCCTTAC CTATCCAGGA
TCGGGGACCC GAGTTGAGCT GAGATTACCT ATAACATCTT CAGAAAAAGA AAGCGGTGAA
AACGACAGTA ATGGGAGGGA AAGCCATGTA TAA
 
Protein sequence
MPLIKKLITK LRPKGILWEF FQRQLVGALA AGLIIFFCIY LIWPGDMDLE IATAIVLGSP 
VVVFLSSWVS WYKYLRNLKQ SINYMGRYIL ELKRGNLNNR LDIHRDDEIQ DLGERLEELT
KDYKQQVRAS QKKINENKDL IARAEEAASL EERRKLAREL HDAVSQQLFA ASMSMKAMDK
MIYQDPDKAR QLFSKTTSMI QNAQQELRAL ILHLRPVTLE GKSLSEGLEQ LLQEIKDKHK
NFNISWEITQ LPELASGVED QVFRVIQEAI SNMLRHSQAK NFIVNGKYKG NRIYISLEDD
GVGFNLSQAL NKQSSSYGLK TMKERMVELG GHLNILTYPG SGTRVELRLP ITSSEKESGE
NDSNGRESHV