| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_2053 |
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| Symbol | |
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| ID | 6315571 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010718 |
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| Strand | - |
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| Start bp | 2169997 |
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| End bp | 2170941 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 642644441 |
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| Product | Substrate-binding region of ABC-type glycine betaine transport system |
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| Protein accession | YP_001918208 |
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| Protein GI | 188586663 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR03414] choline ABC transporter, periplasmic binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000000296796 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.00000000325695 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACGCTC ATGGAAGCGG AAAACGTAAA GTTTTAATAG TAGCAATGCT TATTACAGGA
ATTATTTTTG CAGGGATTGC TACCGGATGT GAAGAAGAAA GAGATGTAGA ACTTGCTATG
GTCGAATGGA CATGCTCTAC TCAGAAGAGT CATATCAACG AAGCTGTATT AGAGACATTA
GGTTACGATG TTAACGTTAA GACTTACAAT CTCCCTGTAA TCCTTGAAGG AATGGCAGAT
GGGCAAATTG ATGCCTTTAC AGATGCATGG TTTCAAACTT GGGGAACCCC CCTTGAAAAT
GCTTTGGAAG AAGGGGATGT AGTTCATTTA GAAACTCATT TAGATGAAAC TAATTACGCG
CCAGCTGTTC CCACTTATGT ATATGAGGAA GGGGTAACCT CCCTAGAAGA TTTAGCCGAT
CACTCGGAAA AATTTGAGTA TACTTATTAT GGCTTGGAAC CAGGGAATGA CGGTAATGAG
ATTATGATCG AAGCTTTTGA AAATGATACC TACGGTCTAG GTGAATGGGA TATCATGGAA
AGTAATGAAG CTGCTATGAT CGCTGATGTT GAGCAAAAGA TAGAAAATGA AGAATGGGTA
GTCTTTAGCG GTTGGGAACC CCATTACATG AATGTAATAT TCGATATGGA ATATTTGGAT
GATCCCAAAG GAATTTGGGG TGAAGGTGAG CAAGTTGGTA CCATTGCAAG ACCTGGCTTA
GAAGATGACA ATCCACAACT AGCTCAATAT TTGAAACAAT TTGACGTAGA TGTAGACACT
GTTGACGAAT GGGTTTACGA ATACGGTTAT GAAGACCGTG ACCCAGACGA AGTTGCGGAT
GAATGGATTA GCGAGAACTT AGATAAGGTA TTAGAGTGGG TTGATGGATT AGAAACTGTC
GATGGACAAG ATGCTCAAGA AGCATTGCGT GAAGCTTACG AATAA
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| Protein sequence | MNAHGSGKRK VLIVAMLITG IIFAGIATGC EEERDVELAM VEWTCSTQKS HINEAVLETL
GYDVNVKTYN LPVILEGMAD GQIDAFTDAW FQTWGTPLEN ALEEGDVVHL ETHLDETNYA
PAVPTYVYEE GVTSLEDLAD HSEKFEYTYY GLEPGNDGNE IMIEAFENDT YGLGEWDIME
SNEAAMIADV EQKIENEEWV VFSGWEPHYM NVIFDMEYLD DPKGIWGEGE QVGTIARPGL
EDDNPQLAQY LKQFDVDVDT VDEWVYEYGY EDRDPDEVAD EWISENLDKV LEWVDGLETV
DGQDAQEALR EAYE
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