Gene Nther_2030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_2030 
Symbol 
ID6315842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp2142733 
End bp2143164 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content37% 
IMG OID642644418 
Productprotein of unknown function DUF296 
Protein accessionYP_001918185 
Protein GI188586640 
COG category[R] General function prediction only 
COG ID[COG1661] Predicted DNA-binding protein with PD1-like DNA-binding motif 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value0.369285 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTAA AAGAATTTAA GCAGGGCAGG ACCTTTATGG GTAGGCTCCC CAAGGGTGAA 
GATCTATTAA CTTCTATTGA AGCAATAGCC AAGGAGAAAG AGATAAAAGT TGCTAGAGTA
GAATTGATAG GAGTAGTTGA AAATGCCGTT GTAGGCTTTT TTCAGCACGA TAAAAAACAA
TATAAACCTA TTAAAATTGA TGAGCACATG GAAATTGTCA ACGCAGTAGG TAATATTTCC
CAAAAAGATG GGGAAATTAA AGCTCATATT CATATCACTC TAGGTGATCA AGATGGCAAT
ACATACTCAG GACACCTAAT GGAAGGTTCT AATATCTTTG CTGGTGAGAT TGTAATGCAA
GAGCTTGTTG GACCAGAATT GCATAGAAAG TACGATGAAA GCACGGGAAT ATCTCTCTGG
GATATAAATT AA
 
Protein sequence
MKVKEFKQGR TFMGRLPKGE DLLTSIEAIA KEKEIKVARV ELIGVVENAV VGFFQHDKKQ 
YKPIKIDEHM EIVNAVGNIS QKDGEIKAHI HITLGDQDGN TYSGHLMEGS NIFAGEIVMQ
ELVGPELHRK YDESTGISLW DIN