| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_2010 |
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| Symbol | |
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| ID | 6314477 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010718 |
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| Strand | - |
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| Start bp | 2118239 |
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| End bp | 2120368 |
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| Gene Length | 2130 bp |
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| Protein Length | 709 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 642644398 |
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| Product | ribonuclease R |
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| Protein accession | YP_001918165 |
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| Protein GI | 188586620 |
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| COG category | [K] Transcription |
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| COG ID | [COG0557] Exoribonuclease R |
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| TIGRFAM ID | [TIGR00358] VacB and RNase II family 3'-5' exoribonucleases
[TIGR02063] ribonuclease R |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000115062 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 68 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATACTTA GAGACAAAAT TATCAACTTC ATGAAAGCAG ATGCTTATAA ACCTATGACC
TTTGAAGAGT TAAAAGATGA ATTTAAAATT AACAAACCTA GACAGGTCAA ACGGTTTAAA
AAGATATTGA AAAAGATGAC TCGAGATGGA CAGATTGTGA AAACTAGATA TGGCTATTAT
GGTTTACCGG AGCGTATGAA TTTGCAAATA GGAACAATCC AGGGTCATCC TAAAGGATAT
GCTTTTCTTT TACCAGATAA GCCTGGTAGT CCTGATGTGT TTTTAAGCCC TAAAAGTCTA
AATGGAGCCC TACACAATGA CAAAGTATTA GTAAGAATAC ATAAAGAGGA GATGCTGAAC
CAAAAACCTG AAGGAGAAGT AGTACGAATT ATTTCCCGGG GAATGTCCGA AGTAGTTGGT
ACATTTGATA AAAGTGATCG ATTTGGTTTT GTGGTTCCAG ATGATGATAG ATTCTTCAGA
GATGTGTTTA TAAATAAAGC AGATGCCAAT GGTGCTAAAA ATGGCCAAAA GGTTGTTGCT
CAAATCACAG GTTGGCCCGA TACTCCGGCC AAAAACCCTG AAGGTGAGAT CATTAAAGTA
ATTGGAAATC CTAGTGATCC TGGTGTGGAT ATTGAGACTA TTATAAATAA ATACGGTCTG
TCAGAAGATT ATCCGCCAAA AGTCAAAGAA CAATTAGAGG AAGTTCCTAA TGAGATTAGC
CCGAAAGATT ACGAAGGAAG AGAGTTGATT CAAGGGTTAC CAACTGTAAC CATTGATGGT
AGCGATGCTA AGGACTTGGA TGATGCAGTC TCTTTAGAGA AACTCGATAA TGGAAATATG
GAACTAGGTG TACATATAGC TGATGTCAGT TACTATGTCA GAGAAGGAAC TCCACTAGAT
AAAGAAGCTC GTCAAAGGGG TACTAGTGTT TATTTGGTGG ATCGTGTTTT ACCTATGTTA
CCACCAAAGT TATCAAATAA TATTTGTAGT CTAAACCCAG GAGTAGAACG CTTGACTATG
AGCGCTTTTG TAGAACTAAC AGAAGAAGGA GACATTGCAA ATTATAGATT GACTCCTAGT
GTAATCAAGA GTAACTACCG CTTAACCTAT GAAGAGGTCA ATGAGTTATT TGATGGTAGT
AAAGAGATAG AAGAAAAATA TCCAGATGTA GCCTGGATGT TATTTGAAAT GAAAACAATC
TCTGAAAAAC TTAGGGAACG AAGATTTGAT GAAGGGGCTA TAGACTTTGA ATTTGATGAA
CCAGTTGTGG TATTAGATGA TCAAGGGAAA CCAGAAAGTG TTGAAAAACG AGCAAGAGGA
TCCGCAGAAA AGTTGATAGA AGAATTTATG CTACTAGCTA ATAGAGTTGT AGCCGAACAC
CATTATAACC TTGATATGCC TTTTATTTAC AGAGTCCACG AACAGCCTGA TGATGAAAAA
GTTTCAACTT TCAGGGAGTT TGCGTCAAAG TTTGGGTATT ATTTGCCTAA ACCGGAAGGG
GAAGAAATAT ATCCCATCGA ATTTCAAAAA GTTTTAGAAG AAGCAAAGGA TACTAGAGAG
GAACGTGCTA TTAGCACTAT GATGCTCAGG TCAATGAAAC AGGCTAGATA TGCAGCTGAA
AGCCTGGGCC ACTTTGGGCT ATCTTTTCAA TATTATACTC ACTTTACTTC ACCTATTAGA
AGATATCCCG ACTTAGTAGT TCATAGGATT ATGAGAGAAA TTATTACCAA GAAAGACTTA
AAAGAGGCCA GACAAAAGAA ATTACAAAGT AAATTAGAAG AAATAGCCTA TCAATCTTCT
TTGAGGGAAC AAGAAGCTAC AGAAGCAGAG AGAGAATCAG TTGATTATAA AATGGCCGAG
TATATGGAAC AATTTGTAGG GGATGATTTT CCAGGAATAG TAAGTTCTGT AACTTCCTTT
GGTATATTCA TAGAGTTACC AAATTTAGTT GAAGGTCTTG TGCATGTAAG TTCTATGACT
GATGATTACT ATTACTTTGA CGAAGAAAAA TTTGCTTTAA TTGGTGAACA GACAAGAAAA
ACTTATCGAA TCGGGGATGA AGTTAAAGTT AAAGTGGTTA AAACCTCAAA GGAAGATTGT
CAAGTTGACT TTGAACTAGT TGAAGATTAG
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| Protein sequence | MILRDKIINF MKADAYKPMT FEELKDEFKI NKPRQVKRFK KILKKMTRDG QIVKTRYGYY
GLPERMNLQI GTIQGHPKGY AFLLPDKPGS PDVFLSPKSL NGALHNDKVL VRIHKEEMLN
QKPEGEVVRI ISRGMSEVVG TFDKSDRFGF VVPDDDRFFR DVFINKADAN GAKNGQKVVA
QITGWPDTPA KNPEGEIIKV IGNPSDPGVD IETIINKYGL SEDYPPKVKE QLEEVPNEIS
PKDYEGRELI QGLPTVTIDG SDAKDLDDAV SLEKLDNGNM ELGVHIADVS YYVREGTPLD
KEARQRGTSV YLVDRVLPML PPKLSNNICS LNPGVERLTM SAFVELTEEG DIANYRLTPS
VIKSNYRLTY EEVNELFDGS KEIEEKYPDV AWMLFEMKTI SEKLRERRFD EGAIDFEFDE
PVVVLDDQGK PESVEKRARG SAEKLIEEFM LLANRVVAEH HYNLDMPFIY RVHEQPDDEK
VSTFREFASK FGYYLPKPEG EEIYPIEFQK VLEEAKDTRE ERAISTMMLR SMKQARYAAE
SLGHFGLSFQ YYTHFTSPIR RYPDLVVHRI MREIITKKDL KEARQKKLQS KLEEIAYQSS
LREQEATEAE RESVDYKMAE YMEQFVGDDF PGIVSSVTSF GIFIELPNLV EGLVHVSSMT
DDYYYFDEEK FALIGEQTRK TYRIGDEVKV KVVKTSKEDC QVDFELVED
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