Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nther_1983 |
Symbol | |
ID | 6315897 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
Kingdom | Bacteria |
Replicon accession | NC_010718 |
Strand | - |
Start bp | 2088604 |
End bp | 2091264 |
Gene Length | 2661 bp |
Protein Length | 886 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 642644372 |
Product | TnsA endonuclease |
Protein accession | YP_001918140 |
Protein GI | 188586595 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 0.176363 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCAAAAA ATTTTGATTT TGATTATTGG TGTTTAAAGA ACAAAATTCC AGAACAAACA AAAAAATATA TTGAAAACAT AAGAGAAAGT CCTCCATCTA GAAATGTTCA AAGTGGCCCC AAAAATGTAA GGGGTAATTA CCCATCAAAG AAAATGGGGT GTACTATACA ATTCGAGAGC CATACGGTTG AACTGGCAGC TATTTATTTA AAGGAGTATA ACAACGAAAT AAAAGAATTC TATGATCAAC CTCCATCAAT ACCTATTAAA TACAAAAAAA ATGGACAATC AAAAGGGATG CGCTATACTC CAGATTTTTT TGTAATTGAA GATGATAAGG CTGGATGGGA AGAATGGAAA ACTGAAGAAG ATTTGATTAG ATTAGAAGAG AAAAACCCAA ATAGATATTA TAAAGACACT AACGGTCAAT GGCGGTGTCC GCCTGGAGAA GAGTATGCAA AAAAATATGG CTTGTTCTTT AGAGTTAGAT CTTCTTCAGA AATAGATGAA AACTTATATA ATAATACGAT TTTCTTAGAA GATTACTTAA GATATAATAT CGAAGTAGAT GATATAACTG TTAATACAAT CATATCGACA GTTACTTTGG AGCCTGGAAT TAAACTGGAT AAGTTAATAA AAAGTTTAGG AGAGGAATAT GTTGATTCGA TATACCACCT AATAGTAAGT AATGAATTAT TTGTAGACTT AAAAAATGAA ATGTTAGGAA GTAGAATGTT TCCTCCACCT ATTTATCCCG ATGAATTAAC AGCAAAAGCA TTTAATTATT CGATATCAAA AACTCAGGAA CAAAGACCAG AAATTATTGA TATTAAAATT GGAAACAAAA TAAATTGGGA TGGGCGCTCA TTTACTATAG CTAACATTGG AGAAACTACC ATAACTTTAA TATCTCAAGA CGACAACCAG CAGATAGACC TCCCACACAA CAGTTTTGAA GAATTGTTAC AAAATGGGAA GGTTAAGTTA GATAAGATTG GTGAAAACAC AAATAAAGAT AATGAAAAAA TTAATGAAAT TTTATCAAAG GCCAGCCCTG AGGCAATGGA AATAGCAACT AAAAGATATG AAGAAATAGT ACCTATTTTA AATGGCAAAA ACCCTAATAC GGATACTCCT CCAAGAACAT TGCGAAATTG GGTCTCAAAC TACAGAGAAG CTGAAAAAGT CTTTGGAAAT GGATATGTTG GGTTATTGCC CAGACATAAA GACAAGGGAA ATAAAATGCC CCAAATCCAC CAGAGGACTA GAGAACTTAT GGAAGAAATA ATAGAAACTG ACTACGAAAA CACTAAACAA AAAAATAAGA ATTCTGTTTA TCAGAAATTT AGAATTGAAT GTGAGAAGCA AGGATTGGAA CCATCCAGTT ACAAAACTTT CATAAATGAA ATAAATAAAC GCCCCAACTA TGAGAAAGTC AAAAAGAGAG AAGGTTCGAA AGCTAGTTAT CCGTATGAAC CACCGCTAAG ATTAGACCAG AATACCCCAA AACATGGAAA CAGACCATTT GAGATATGCC ATATTGATCA TACTCAAATG GATATTGAGT TGGTAAATTC AATTACACGA GAAAACATGG GTAAACCATG GGTGACATTC ATGACTGATG CATTTTCTAG GAGGTTATTA GGAATTTATT TAACCTTTGA TGAACCGTCA TATAGGTCTA TAATGATGGT CGTTCGTGAG TGCGTCAGAA GATTTAATAG ACTACCTCAA AACTTTGTTA TTGATGGTGG AAAAGAGTTT CATAGTATAT ATTTTGATAG TTTCCTGGCG CGCTATGAAT GTATTAAAAA AACCAGACCA CCTTCAAAAT CTCGTTTTGG AAATGTAATT GAGCGTTTGT TTGGAACAAC TCATTCTCAA CTTATATATA ATCTCCAGGG GAATACCCAA GCTACTAAAA AAGTTAGACA AATAACTAAA GGAACAAATC CGAAAAATAA AGCTATATGG ACATTAGAGG AACTTTATAC AGTTCTTTGT GAATGGGGGT ATGAGTTATA TGATACAACA CCCCATCCTG CTTTGAGTCA AACACCAAGA GACGCTTTCA ATGATGGGAT GGTATATTCA GGAAAAAGGT ATTCCCGATT AATCAGGTAT GATGACCAGT TTAAGATTGA TACTCTTCCC TCTACACAAA AAGGTACGGC AAAAGTACAA CCGGGGAGGG GTGTGAAAAT TGATAAACGG TATTTTTGGC ACGACCAATT TAAAAACCCT GAAATAGAAT ATACACAAGT TCCGGTTAGA TATGACCCCT TCAATATGGG TATTGCGTAT GTTTTTGTAA ATAAACATTG GGTTAAATGT ATTTCCGAAT ACTATTCTGT ATTCAAAAAT CGCACTGAAA AGGAATTAAA AAGGGCAAGT GAAGAATTAA GACAAAAACA AAGTCCTTCA AAATCTGCAA TATCAGCAAA AAAACTAGCT AACTTCCTGA TTCAAATTGA GGAAAAGGAG AGTAAACTTT TAAAGCAGAA AAAAGAACGT GCAATGGAAA ACCAAAATGT TATTGACAAA ATTACTGGCA ATCCAAATGT GGATGAAGTG AATGTTACAC ATGAACCCCC TGTGTTTAAT GATGATTTGA TAGATCCTAA CGAAAATTCA GATACTTATG AGGAGTTTTA G
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Protein sequence | MSKNFDFDYW CLKNKIPEQT KKYIENIRES PPSRNVQSGP KNVRGNYPSK KMGCTIQFES HTVELAAIYL KEYNNEIKEF YDQPPSIPIK YKKNGQSKGM RYTPDFFVIE DDKAGWEEWK TEEDLIRLEE KNPNRYYKDT NGQWRCPPGE EYAKKYGLFF RVRSSSEIDE NLYNNTIFLE DYLRYNIEVD DITVNTIIST VTLEPGIKLD KLIKSLGEEY VDSIYHLIVS NELFVDLKNE MLGSRMFPPP IYPDELTAKA FNYSISKTQE QRPEIIDIKI GNKINWDGRS FTIANIGETT ITLISQDDNQ QIDLPHNSFE ELLQNGKVKL DKIGENTNKD NEKINEILSK ASPEAMEIAT KRYEEIVPIL NGKNPNTDTP PRTLRNWVSN YREAEKVFGN GYVGLLPRHK DKGNKMPQIH QRTRELMEEI IETDYENTKQ KNKNSVYQKF RIECEKQGLE PSSYKTFINE INKRPNYEKV KKREGSKASY PYEPPLRLDQ NTPKHGNRPF EICHIDHTQM DIELVNSITR ENMGKPWVTF MTDAFSRRLL GIYLTFDEPS YRSIMMVVRE CVRRFNRLPQ NFVIDGGKEF HSIYFDSFLA RYECIKKTRP PSKSRFGNVI ERLFGTTHSQ LIYNLQGNTQ ATKKVRQITK GTNPKNKAIW TLEELYTVLC EWGYELYDTT PHPALSQTPR DAFNDGMVYS GKRYSRLIRY DDQFKIDTLP STQKGTAKVQ PGRGVKIDKR YFWHDQFKNP EIEYTQVPVR YDPFNMGIAY VFVNKHWVKC ISEYYSVFKN RTEKELKRAS EELRQKQSPS KSAISAKKLA NFLIQIEEKE SKLLKQKKER AMENQNVIDK ITGNPNVDEV NVTHEPPVFN DDLIDPNENS DTYEEF
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