Gene Nther_1983 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1983 
Symbol 
ID6315897 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp2088604 
End bp2091264 
Gene Length2661 bp 
Protein Length886 aa 
Translation table11 
GC content33% 
IMG OID642644372 
ProductTnsA endonuclease 
Protein accessionYP_001918140 
Protein GI188586595 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.176363 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCAAAAA ATTTTGATTT TGATTATTGG TGTTTAAAGA ACAAAATTCC AGAACAAACA 
AAAAAATATA TTGAAAACAT AAGAGAAAGT CCTCCATCTA GAAATGTTCA AAGTGGCCCC
AAAAATGTAA GGGGTAATTA CCCATCAAAG AAAATGGGGT GTACTATACA ATTCGAGAGC
CATACGGTTG AACTGGCAGC TATTTATTTA AAGGAGTATA ACAACGAAAT AAAAGAATTC
TATGATCAAC CTCCATCAAT ACCTATTAAA TACAAAAAAA ATGGACAATC AAAAGGGATG
CGCTATACTC CAGATTTTTT TGTAATTGAA GATGATAAGG CTGGATGGGA AGAATGGAAA
ACTGAAGAAG ATTTGATTAG ATTAGAAGAG AAAAACCCAA ATAGATATTA TAAAGACACT
AACGGTCAAT GGCGGTGTCC GCCTGGAGAA GAGTATGCAA AAAAATATGG CTTGTTCTTT
AGAGTTAGAT CTTCTTCAGA AATAGATGAA AACTTATATA ATAATACGAT TTTCTTAGAA
GATTACTTAA GATATAATAT CGAAGTAGAT GATATAACTG TTAATACAAT CATATCGACA
GTTACTTTGG AGCCTGGAAT TAAACTGGAT AAGTTAATAA AAAGTTTAGG AGAGGAATAT
GTTGATTCGA TATACCACCT AATAGTAAGT AATGAATTAT TTGTAGACTT AAAAAATGAA
ATGTTAGGAA GTAGAATGTT TCCTCCACCT ATTTATCCCG ATGAATTAAC AGCAAAAGCA
TTTAATTATT CGATATCAAA AACTCAGGAA CAAAGACCAG AAATTATTGA TATTAAAATT
GGAAACAAAA TAAATTGGGA TGGGCGCTCA TTTACTATAG CTAACATTGG AGAAACTACC
ATAACTTTAA TATCTCAAGA CGACAACCAG CAGATAGACC TCCCACACAA CAGTTTTGAA
GAATTGTTAC AAAATGGGAA GGTTAAGTTA GATAAGATTG GTGAAAACAC AAATAAAGAT
AATGAAAAAA TTAATGAAAT TTTATCAAAG GCCAGCCCTG AGGCAATGGA AATAGCAACT
AAAAGATATG AAGAAATAGT ACCTATTTTA AATGGCAAAA ACCCTAATAC GGATACTCCT
CCAAGAACAT TGCGAAATTG GGTCTCAAAC TACAGAGAAG CTGAAAAAGT CTTTGGAAAT
GGATATGTTG GGTTATTGCC CAGACATAAA GACAAGGGAA ATAAAATGCC CCAAATCCAC
CAGAGGACTA GAGAACTTAT GGAAGAAATA ATAGAAACTG ACTACGAAAA CACTAAACAA
AAAAATAAGA ATTCTGTTTA TCAGAAATTT AGAATTGAAT GTGAGAAGCA AGGATTGGAA
CCATCCAGTT ACAAAACTTT CATAAATGAA ATAAATAAAC GCCCCAACTA TGAGAAAGTC
AAAAAGAGAG AAGGTTCGAA AGCTAGTTAT CCGTATGAAC CACCGCTAAG ATTAGACCAG
AATACCCCAA AACATGGAAA CAGACCATTT GAGATATGCC ATATTGATCA TACTCAAATG
GATATTGAGT TGGTAAATTC AATTACACGA GAAAACATGG GTAAACCATG GGTGACATTC
ATGACTGATG CATTTTCTAG GAGGTTATTA GGAATTTATT TAACCTTTGA TGAACCGTCA
TATAGGTCTA TAATGATGGT CGTTCGTGAG TGCGTCAGAA GATTTAATAG ACTACCTCAA
AACTTTGTTA TTGATGGTGG AAAAGAGTTT CATAGTATAT ATTTTGATAG TTTCCTGGCG
CGCTATGAAT GTATTAAAAA AACCAGACCA CCTTCAAAAT CTCGTTTTGG AAATGTAATT
GAGCGTTTGT TTGGAACAAC TCATTCTCAA CTTATATATA ATCTCCAGGG GAATACCCAA
GCTACTAAAA AAGTTAGACA AATAACTAAA GGAACAAATC CGAAAAATAA AGCTATATGG
ACATTAGAGG AACTTTATAC AGTTCTTTGT GAATGGGGGT ATGAGTTATA TGATACAACA
CCCCATCCTG CTTTGAGTCA AACACCAAGA GACGCTTTCA ATGATGGGAT GGTATATTCA
GGAAAAAGGT ATTCCCGATT AATCAGGTAT GATGACCAGT TTAAGATTGA TACTCTTCCC
TCTACACAAA AAGGTACGGC AAAAGTACAA CCGGGGAGGG GTGTGAAAAT TGATAAACGG
TATTTTTGGC ACGACCAATT TAAAAACCCT GAAATAGAAT ATACACAAGT TCCGGTTAGA
TATGACCCCT TCAATATGGG TATTGCGTAT GTTTTTGTAA ATAAACATTG GGTTAAATGT
ATTTCCGAAT ACTATTCTGT ATTCAAAAAT CGCACTGAAA AGGAATTAAA AAGGGCAAGT
GAAGAATTAA GACAAAAACA AAGTCCTTCA AAATCTGCAA TATCAGCAAA AAAACTAGCT
AACTTCCTGA TTCAAATTGA GGAAAAGGAG AGTAAACTTT TAAAGCAGAA AAAAGAACGT
GCAATGGAAA ACCAAAATGT TATTGACAAA ATTACTGGCA ATCCAAATGT GGATGAAGTG
AATGTTACAC ATGAACCCCC TGTGTTTAAT GATGATTTGA TAGATCCTAA CGAAAATTCA
GATACTTATG AGGAGTTTTA G
 
Protein sequence
MSKNFDFDYW CLKNKIPEQT KKYIENIRES PPSRNVQSGP KNVRGNYPSK KMGCTIQFES 
HTVELAAIYL KEYNNEIKEF YDQPPSIPIK YKKNGQSKGM RYTPDFFVIE DDKAGWEEWK
TEEDLIRLEE KNPNRYYKDT NGQWRCPPGE EYAKKYGLFF RVRSSSEIDE NLYNNTIFLE
DYLRYNIEVD DITVNTIIST VTLEPGIKLD KLIKSLGEEY VDSIYHLIVS NELFVDLKNE
MLGSRMFPPP IYPDELTAKA FNYSISKTQE QRPEIIDIKI GNKINWDGRS FTIANIGETT
ITLISQDDNQ QIDLPHNSFE ELLQNGKVKL DKIGENTNKD NEKINEILSK ASPEAMEIAT
KRYEEIVPIL NGKNPNTDTP PRTLRNWVSN YREAEKVFGN GYVGLLPRHK DKGNKMPQIH
QRTRELMEEI IETDYENTKQ KNKNSVYQKF RIECEKQGLE PSSYKTFINE INKRPNYEKV
KKREGSKASY PYEPPLRLDQ NTPKHGNRPF EICHIDHTQM DIELVNSITR ENMGKPWVTF
MTDAFSRRLL GIYLTFDEPS YRSIMMVVRE CVRRFNRLPQ NFVIDGGKEF HSIYFDSFLA
RYECIKKTRP PSKSRFGNVI ERLFGTTHSQ LIYNLQGNTQ ATKKVRQITK GTNPKNKAIW
TLEELYTVLC EWGYELYDTT PHPALSQTPR DAFNDGMVYS GKRYSRLIRY DDQFKIDTLP
STQKGTAKVQ PGRGVKIDKR YFWHDQFKNP EIEYTQVPVR YDPFNMGIAY VFVNKHWVKC
ISEYYSVFKN RTEKELKRAS EELRQKQSPS KSAISAKKLA NFLIQIEEKE SKLLKQKKER
AMENQNVIDK ITGNPNVDEV NVTHEPPVFN DDLIDPNENS DTYEEF