Gene Nther_1960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1960 
Symbol 
ID6315907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp2068381 
End bp2069910 
Gene Length1530 bp 
Protein Length509 aa 
Translation table11 
GC content41% 
IMG OID642644350 
Productprotein of unknown function DUF112 transmembrane 
Protein accessionYP_001918118 
Protein GI188586573 
COG category[S] Function unknown 
COG ID[COG3333] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0173399 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value0.831984 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCAGATA TTTTAGCCAC TGTACCTGCA ATTTTGGATG CTTCATATTT GTTAATTGTG 
GCAGCTGGTG TGTTTGGAGG TATTTTGGTA GGTGCTCTTC CAGGACTTAC TCCTACTATG
GGGGTAGCTT TGCTAGTTCC TTTTACATTC TATCTGCCCG CAGAACAGGG CTTATTAATG
TTGGGTTCAG TATATGTAGG CAGTGTATAC GGTGGGGCAA TAACAGCAAT TTTAATAAAT
ATTCCAGGAG CGCCAGCTTC AATAGCTACA ATAATGGATG GTCATCCCAT GGCAAACAAA
GGTGAAGGTG AAAAGGCCAT TCATCTGGCC ACTCTTTCTT CTTTTATAGG TGGCGTATTT
GGTGTGATAT TACTATTATT TTTTGCTCCT GCTTTGGCAA GGGTCTCACT AAACTTTGGG
CCTGCTGAGC ATTTTTGGAT AGCTGTTTTT GGAATCACAG TGATAGCTGG CTTATCTAAA
GGAAGTATTT GGAAGGGAAT TATGGGAGGC GCTGCGGGTT TATGGTTGAG CACAATTGGC
ATTGGTGAAA TAACGGGTAC AGCTCGGTTC ACCTTTGAGT CGGCTCATTT GACAGGTGGC
ATTGGCTTAG TCTCTATGTT AATTGGCTTA TTTGCATTTC CCCAGGCTTT GGTCTTTGTA
GAGCGCTTGT TTCAAAGTAA AGAAACACGA AAGTTTAATG AAAATGTGTT TCATAAAAGC
AGATCCTTCC TGAAAGGGAT AAAAGACATA ATTAAGTACA AGAAGAATGT GATTATGGGT
TCGATAATAG GTGGCTTGGT AGGATTAGTG CCTGGAGCTG GTGGTCAAAT TGCTGGTTTA
GTTGCTTACA ACGAAGTGAA GCGTTATTCC CCGGAAAAGG ATAAGTTCGG CACAGGACAT
GAAGGAGGAA TAATTACTAC CGAAAGTGCT AATAACGCCA TGGTTGGTTG TTCTCTTGTT
CCCCTTTTGA CCCTGGGGAT TCCAGGGAGC CCCACGGCGG CAGTTCTATT AGGCGGATTA
CTCATGAATG GTCTCTGGCC AGGACCTGAA ATGTTTCAGG AAAACGCTTC AATTACCTAT
ACTTTTATTT TAGGAATGGT AGCAGCCCAA TTTTTTATGT TATTTATTGG GGGCTTTGGA
GGACGTTTTT TCAAAAGAGT GATGTATGTA TCACCTGGGA TTATGGCTCC TTTAATTTTA
GTGTTTTGCG TTTTAGGTTC ATTTGCAGAA AGAAACAATT TTAGTGATGT GTGGTTTATG
TTAATAGTTG GTGTTTTGAT GTATTTTGGT ATGAAATTTG GTTTTAGCCC GGCACCGGTT
GGTTTAGGAT TTATCCTGGG TGAATATGCC GAAAGAGGAT TTTTATTAGC AAATCGGGCT
AGTGTCAGTG AAGGATCATT AATGCTGCAT TTTCTAGACA GCCCCATAGT TATTGTTTTA
ATGCTATTGA CAGCAATCTC AATTATAACT ACTGCAGTAT TAGAAATCAG TAAAAAACAA
AAGAAGTTGA AGGAGGTTGA GCAAAAATGA
 
Protein sequence
MADILATVPA ILDASYLLIV AAGVFGGILV GALPGLTPTM GVALLVPFTF YLPAEQGLLM 
LGSVYVGSVY GGAITAILIN IPGAPASIAT IMDGHPMANK GEGEKAIHLA TLSSFIGGVF
GVILLLFFAP ALARVSLNFG PAEHFWIAVF GITVIAGLSK GSIWKGIMGG AAGLWLSTIG
IGEITGTARF TFESAHLTGG IGLVSMLIGL FAFPQALVFV ERLFQSKETR KFNENVFHKS
RSFLKGIKDI IKYKKNVIMG SIIGGLVGLV PGAGGQIAGL VAYNEVKRYS PEKDKFGTGH
EGGIITTESA NNAMVGCSLV PLLTLGIPGS PTAAVLLGGL LMNGLWPGPE MFQENASITY
TFILGMVAAQ FFMLFIGGFG GRFFKRVMYV SPGIMAPLIL VFCVLGSFAE RNNFSDVWFM
LIVGVLMYFG MKFGFSPAPV GLGFILGEYA ERGFLLANRA SVSEGSLMLH FLDSPIVIVL
MLLTAISIIT TAVLEISKKQ KKLKEVEQK