Gene Nther_1945 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1945 
Symbol 
ID6317183 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp2051612 
End bp2053210 
Gene Length1599 bp 
Protein Length532 aa 
Translation table11 
GC content38% 
IMG OID642644327 
ProductOuter membrane protein-like protein 
Protein accessionYP_001918104 
Protein GI188586559 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.203704 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTATA AAACCCTGAT TTGTGTTTTG GTGATGATGA TGGTGGTTTC TCTCACTACA 
GTCAATACTA CGGCTACAGA AGATAGTGAT GATGACAATA AGGAAGTAGT AGAACTTACC
TTGGAAAAAG CTCGAAGGCG AATTGTAGAA CATTCTCGTG AAGCTGATAG GGCTAGATTA
GGACTCGAAG AATTAAACAT AGCAGTTGAA AGATTACGAG ATGAATTGGA TGAGCTAGAA
GAGGGTATTG AGGAATTAGA AGATGGTGAT TTTGATCTGG ATGGATTTAG TGATGATATC
GATGGAGAGG TTCAAGATAA TGACTACGCT TTAAAGATGG AGACTGAAAG TTCTAATAGA
AACCTGTTAG CTCAAAACTC ATCTGTCAAT CTAGATGATG ATCCAGAAAT ACCTTTTGAA
CCACCTAATG GAGATGAACC TGAACTTCCT ATTCCTGAAG AAGAGATTGA AGAGATAATT
GAGGAAGCGA TCCAGGATGC TATAGAAGAA ATGGTATCAG ATATGGAAGA AATGTTAGAG
GATATGGCGT CTGAAATTTT TCAAGAGATG ATGGATGAAG AATTGGAAGA TATGGAAAAA
GCCAAGAAAG AACTGGAACA AGCTCTAGAA GAAGCAGAAC AAGGTGAAGA ACTTGCTGAA
ATGGAATGGG AAGCGAATAA AGAAGTGATG AAATTTGGAG CAGAATCAAC TTATATAGGT
TTATTGTCCC TTGAAGAACA GATAGCAGCT ATAGAAGAAA GTATTTCCAC TTTTGAGCGC
TTATTAGAAG AAGAACGGCA GCAACTCGAA CTTGGTGAAT CTTTACCTGT CCAAGTTGAA
ATGGTAGAAC TCGAAAAAAA CGAAATGGAA AACGCTTTAA AATCATTAAA GGAAAATAAA
AGGGAAATGG AAAAAGAATT TTTAGATACC CTGGGTTATT CAACGGATAA GGAACTTAAA
CTGGCAGAAG TGAATTTTGA CTTAGAAAGC TTTCAGCAAG AGCTTGACTT GGAAACTTTT
ACACAAAGGG CATTAGAGGA AGGTGAAGAA ATAAAGATAG CTGAGAAACA GTTAGAATAT
GCTGAAGATA ATTTAGATTG GGCAAGGCAA CAAGATGATA TTTCAGAAAG TGATTACAGG
GAGAGAGAAG TTGCCTTACG AGAAGCTGAA TTAGATCTGG AAGAGGCTGA ACGCACATTA
GAAAAATCAA TATTTGAAGC TTATAATGGT TTTAATGAAA GTTTACGAGA TTATAAAAAT
GCTGACCAAC GATTAAAATT GCAAAAAGAA CTCCTGCGGG GTGAAGAATT GTCGCAAGAT
TTGGGAATGG CAACGAGTAA ACAAGTCTTA GATACTATGG TAGAAGTAGA AGAAGCCAGG
CGAAATTTAA ATCAACAAGA GTATCAAAAC TATTTGGCTA AGCGAGAGCT ACAACTTTTA
AAACAGGGAT ACTTAGTCGA TATACCAACA GGAGCAGGTG AACAAAGGAA TTTTGGGGGA
GAAACTCCTG CCATGTCTCC GGATATGAAT GAACAAGGTA TGGAACCTTC AGGTGGAGGA
CAGCAGCCAG CAGGCCCTGA GGGACAAAGC CCCAGATAA
 
Protein sequence
MNYKTLICVL VMMMVVSLTT VNTTATEDSD DDNKEVVELT LEKARRRIVE HSREADRARL 
GLEELNIAVE RLRDELDELE EGIEELEDGD FDLDGFSDDI DGEVQDNDYA LKMETESSNR
NLLAQNSSVN LDDDPEIPFE PPNGDEPELP IPEEEIEEII EEAIQDAIEE MVSDMEEMLE
DMASEIFQEM MDEELEDMEK AKKELEQALE EAEQGEELAE MEWEANKEVM KFGAESTYIG
LLSLEEQIAA IEESISTFER LLEEERQQLE LGESLPVQVE MVELEKNEME NALKSLKENK
REMEKEFLDT LGYSTDKELK LAEVNFDLES FQQELDLETF TQRALEEGEE IKIAEKQLEY
AEDNLDWARQ QDDISESDYR EREVALREAE LDLEEAERTL EKSIFEAYNG FNESLRDYKN
ADQRLKLQKE LLRGEELSQD LGMATSKQVL DTMVEVEEAR RNLNQQEYQN YLAKRELQLL
KQGYLVDIPT GAGEQRNFGG ETPAMSPDMN EQGMEPSGGG QQPAGPEGQS PR