| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_1941 |
|---|
| Symbol | |
|---|
| ID | 6315853 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010718 |
|---|
| Strand | - |
|---|
| Start bp | 2045217 |
|---|
| End bp | 2045801 |
|---|
| Gene Length | 585 bp |
|---|
| Protein Length | 194 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 642644323 |
|---|
| Product | transcriptional regulator, TetR family |
|---|
| Protein accession | YP_001918100 |
|---|
| Protein GI | 188586555 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.000000874649 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 66 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTCAAAAA TTGACAAAAG CAATAAGAGA ATGGATATTT TAGTGGCTGC GGCGAAAGTT
TTTAGTGAAG AAAACTTCTA TCAAGTAAAG GTTCAGGAGA TAGCTGATGC AGCAGGGATA
GGCAAGGGTA CGATTTATGA ATATTTTAAT AGCAAAGAGG AACTGTTTCA TGAAATGCTT
AGAGAAGGTT TTAAGCAGTA TTATCAAGTA GTAAGAATAG ATCCAAATGA TGAACGCAGT
ATTTGGATAA AATTAGAGGA ATTTTTGAAA AACAATGTTT ATTTTGTTTC AGAGAATAGA
CAAATAGCGT ATTTATTGCT AAGCAATAAT CATCCATTTC AACAAAAATT GACCTCTCAG
ATAATGGAAG TTAGAAAAAG TTTGCTACAT GATATGGAAC AGACTTTTCA ATTAGCCATC
AATGAAGGAG AAATCGAAAA AAAGCCAATA GATTTATTGG CCAGAATTTT CTGGGGAGCT
TTTATGGAGG TCGTTTCGTC TATGATATTA CTTGAAGGTA ACCCCCCTGA TGACGAAACA
ATCAAGGAAG TTATTGGCAC ATTTAAAAAA GGATTAGAGA TTTGA
|
|---|
| Protein sequence | MSKIDKSNKR MDILVAAAKV FSEENFYQVK VQEIADAAGI GKGTIYEYFN SKEELFHEML
REGFKQYYQV VRIDPNDERS IWIKLEEFLK NNVYFVSENR QIAYLLLSNN HPFQQKLTSQ
IMEVRKSLLH DMEQTFQLAI NEGEIEKKPI DLLARIFWGA FMEVVSSMIL LEGNPPDDET
IKEVIGTFKK GLEI
|
|---|
| |