Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nther_1936 |
Symbol | |
ID | 6315848 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
Kingdom | Bacteria |
Replicon accession | NC_010718 |
Strand | - |
Start bp | 2037473 |
End bp | 2038054 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 642644318 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_001918095 |
Protein GI | 188586550 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 62 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTAAATA TTAAAAAGCG TCAAATAATC AAAGCTGCTA CCCAAGTTTT TGCAGAAAAA GGCTATCATG ACACTAAGAT AGATGAAATT GCTCGCGAAG CAGATGTAGC TAAGGGATCA GTTTATCTTT ACTTTCAAAG TAAGGAAGAT TTATTTATAG AAATGATGAA AGATGGAGTT AAACGGTATA AAGATGTCAA AATATCGGTA TTGGAACAGG ACCTTCCTTT ATATCAAAAA CTAAAAAAGA TGTTAATTGA AGAAATAGAA TTTTTGTGGG ATAATCAGCA GGTGGCCAGG TTTCTACTCA CATCTGATAT AGTTACTCAA GACACTTTGT ACAATTGGTT ACTGAAAGTG AGAAATACTT TTATAGAAAA ACTAACATCG GAATTTGACA AAGCTATTGA AACAGGGGAT GTCATAGCTG GCGATTCCTC ACTTTATACC AGAATATTTC GAGGAGTAGA ACATCAAGTC ATAGGTTATT ATATAATTAT TGATGGCAAA AAGCCCAATG AAGAGATGAT AGATAAAGCA CTAGCTGCAT TAACTAAAGG GATTTTTAAG GAAAACAATT GA
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Protein sequence | MLNIKKRQII KAATQVFAEK GYHDTKIDEI AREADVAKGS VYLYFQSKED LFIEMMKDGV KRYKDVKISV LEQDLPLYQK LKKMLIEEIE FLWDNQQVAR FLLTSDIVTQ DTLYNWLLKV RNTFIEKLTS EFDKAIETGD VIAGDSSLYT RIFRGVEHQV IGYYIIIDGK KPNEEMIDKA LAALTKGIFK ENN
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