Gene Nther_1933 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1933 
Symbol 
ID6315845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp2033872 
End bp2034960 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content38% 
IMG OID642644315 
Productalanine racemase domain protein 
Protein accessionYP_001918092 
Protein GI188586547 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3616] Predicted amino acid aldolase or racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGCG AATTAGTTTC AGGTTTAAAG CTAGAAAATC TACCAACTCC AGCTCTACTA 
CTTGATATGA GTAACCTAGA GTACAATATA AATTTATTAG CTGATTTTTT TAGAGACAAG
CCTTGTGATA TCAGGCCACA TATGAAAGGT CATAAAAATT TAACTATTGC ACATATGCAA
ATTGATAGAG GTGCTATTGG AGTGACTTGT GCCAAAACGA GTGAAGCAGA AGTGATGGTC
AACGGAGGAA TTAAAGACAT TTTGATTGCT AATCAGGTAA TAGAAAGCGG GAAAATAAAT
CTTTTAGCTG AACTGGCAAG GCGCGCAGAT ATAAAAGTTG CAGTGGATAG CTATCAAAAT
TGTGAAAATT TATCCCGTAT AGCAGTTGAG CATGGTGTAA CTATAGGGGT TCTTGTAGAA
ATGGATATTG GACTTGGAAG ATGTGGCGTG AAGAGCTTTG ATGAAGGCAT AAATCTTGTT
CAGGAGATAC AAAAACTTGA TAATCTTGAA TTTCGCGGTG TCATGGGTTA TGAGGGACCT
TTTAGAGACA AAACTCAGTC TGAGAAATCT GATATGGTTA AAGAGAGTTT GAGTCGAGTT
GTTCAATTAA AGCGAAGAAT AGAACAGGAA AATATCCAAG TTGAAATTGT CAGTTGCGGC
AGTACAGGTA CTTGGGATAT TACTGGTAAT TACCCCGAAA TAACAGAAAT CCAGGCTGGT
ACTTATCCAT TAATGGAAGT GCCCTATTTA GAGGATGGGT TACCCTTCAA ATCAGCTTTA
TCTGTATTGG CCACAGTAAT CAGTAAGTCT CATGATAAAT TAATACTGGA TTGTGGTTTG
AAAGCCGTGA CAGATGATCA AGGAATACCC AAATTGATGG ATTATGACAG TCCTATTGTC
GGAATTAACG AAGAACACAG CATAGTTGAG ATTGATCACG AAACGGAAAA ACTGGAGATT
GGAGATAAAA TTAGGATATT GCCAGCACAT TCATGTACGA CAGTGAATTT GTACGATTAC
TATTGTTGTC TTCGAAATAA CGAAGTTGTT GATATCTGGC AGGTTCATGC CAGAGGAATG
GTCACTTGA
 
Protein sequence
MKSELVSGLK LENLPTPALL LDMSNLEYNI NLLADFFRDK PCDIRPHMKG HKNLTIAHMQ 
IDRGAIGVTC AKTSEAEVMV NGGIKDILIA NQVIESGKIN LLAELARRAD IKVAVDSYQN
CENLSRIAVE HGVTIGVLVE MDIGLGRCGV KSFDEGINLV QEIQKLDNLE FRGVMGYEGP
FRDKTQSEKS DMVKESLSRV VQLKRRIEQE NIQVEIVSCG STGTWDITGN YPEITEIQAG
TYPLMEVPYL EDGLPFKSAL SVLATVISKS HDKLILDCGL KAVTDDQGIP KLMDYDSPIV
GINEEHSIVE IDHETEKLEI GDKIRILPAH SCTTVNLYDY YCCLRNNEVV DIWQVHARGM
VT