Gene Nther_1904 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1904 
Symbol 
ID6315117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1997372 
End bp1998934 
Gene Length1563 bp 
Protein Length520 aa 
Translation table11 
GC content37% 
IMG OID642644286 
ProductAmidohydrolase 3 
Protein accessionYP_001918063 
Protein GI188586518 
COG category[R] General function prediction only 
COG ID[COG1574] Predicted metal-dependent hydrolase with the TIM-barrel fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCTCAAA AGGCAGATTT AGTAATTAAT AATGCAAAGG TAATTACTTT AAATGATTCC 
CATGATATCG AGCAAGGAGT TACAATTAAA GACGGAAAAA TTTTGATGAC AGGAAATAAT
GAAGAACTTG ACGAATTAAT AGGCAATGAA ACAGAAATCA TGTCACTAGA TGGAAAAACA
GTGGTACCCG GGTTTATTGA TTCCCATGTT CATTTTATGC AAACTGGAAT GAACGAATTG
TTTTTGGATT ATACAGAATT TACTAGCTTG GATGAGTTAC TTAAAGACTT ATCGAGTAAA
ATTGAAACTT CGAGCCCGGG TACCTGGATT CGCGTAGCAA AATATGATGA TGATAAATTA
GCTGAGAAAC GACCTCCCAC TATAAAAGAA TTAGATGAAG TAGCACCTAA CAATCCAATA
TGGATGAATA GAGTAGACTG CCATTCATGT ATAATCAATA GTAAGGCCAT GGAAATTTTG
GATTTAACCA ATGAAGAATT AAAGAATTTG GAAGGTGTGG AACGAGATAC AGACGGACAA
GTCACAGGTA ATATGCGAAA TGTAGCAAAT GGCGTAGTAA GGAAACTTGT TATGGATATG
ATTTCCGAAA AACAGCGACT ACAAGCTATG GATTACGCAA CAGACTTAGC TTTGAAGGCA
GGAATAACTA CTGTTCACAG TATGGAAGGT GGAAAATTAT TTAGTGATCA AGATGTTGAT
ATTCTATTAA GGAAATGGGA AGAAAATCCC CTTTATATAG TAGTTTTCAA CCAAACAACA
GATGTTGGCA GAGTTGTCGA TTTAGGTCTT GAACGAATTG GTGGCTGCAT AATTCTCGAT
GGATCCTTTG GATCAAGAAC GGCAGCTTTA TTGGAACCAT ACACCGATGA CCAATCAACT
AAAGGTGAGT TATATTACTC TCAACAAGAA ATAGATGATT TTGTCATGAA AGCGCACAAA
CAAGGGATGC AAATTACAGT TCACGCTATA GGTGACAGGG CTATAGAACG AATTCTACAA
GCATACGAAA AAGCTCAACA ACAATATCCT AGACAGGACA TTAGACACAG GATTGAACAT
GCAGAACTTA TTAATCGAGA ACAACTAGAA AGATGTCAGA AAATAAATGT TACTTTATCA
GTCCAACCTA CTTTTGAATA CTTTTGGGGC GGACCTGGAA TGTATGGCAC TAGATTGGGC
GAAGACAGAG CTAAAACAAC TAATCCTTAC AGGGATATAA TTGACTCCGG CTGTTTATTA
ATTGGGGGTT CAGACAGTGA TGTAACCCCC ATGAATCCCT TATTAGGGAT TCACGGAGCT
GTAAATCATT CAAATTCTAA ACAACGATTG ACAGTAACTG AGGCTTTAAA ATTATTCACA
ATAAATGCCG CTAAGTCAGT TTACGAAGAA GATTTAAAAG GAAGTATAGA GCCGGGCAAG
TTAGCAAACT TGACCGTTTT AGAACAAGAC ATTTTGGAAA TTTCCCACGA GAAATTAAAA
GATGTTCAGG TTGAAAAAAC AATAATCGAT GGACAAGTTC ATTACCAAAA GAATAACGAC
TAG
 
Protein sequence
MPQKADLVIN NAKVITLNDS HDIEQGVTIK DGKILMTGNN EELDELIGNE TEIMSLDGKT 
VVPGFIDSHV HFMQTGMNEL FLDYTEFTSL DELLKDLSSK IETSSPGTWI RVAKYDDDKL
AEKRPPTIKE LDEVAPNNPI WMNRVDCHSC IINSKAMEIL DLTNEELKNL EGVERDTDGQ
VTGNMRNVAN GVVRKLVMDM ISEKQRLQAM DYATDLALKA GITTVHSMEG GKLFSDQDVD
ILLRKWEENP LYIVVFNQTT DVGRVVDLGL ERIGGCIILD GSFGSRTAAL LEPYTDDQST
KGELYYSQQE IDDFVMKAHK QGMQITVHAI GDRAIERILQ AYEKAQQQYP RQDIRHRIEH
AELINREQLE RCQKINVTLS VQPTFEYFWG GPGMYGTRLG EDRAKTTNPY RDIIDSGCLL
IGGSDSDVTP MNPLLGIHGA VNHSNSKQRL TVTEALKLFT INAAKSVYEE DLKGSIEPGK
LANLTVLEQD ILEISHEKLK DVQVEKTIID GQVHYQKNND