Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nther_1894 |
Symbol | |
ID | 6314622 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
Kingdom | Bacteria |
Replicon accession | NC_010718 |
Strand | - |
Start bp | 1986465 |
End bp | 1987085 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 642644276 |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_001918053 |
Protein GI | 188586508 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family [TIGR02985] RNA polymerase sigma-70 factor, Bacteroides expansion family 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACAATTA TGAAATCTAA TGATGAGTTC TTGGTAAAAC AATGTCAAAA TGGTCATTTA GATGCTTTTG AAGAGCTAGT ACATAAATAT CACCAAAAGG TTTATTCACT GTGCTATAGG TTTTCAGGAA ATCACGATGA TGCTAATGAC CTGGCACAAG AAGCTTTTAT TCGGGTTTAT CATTCCATAA ACAAATTTCA TTTTAAATCC GCATTTTCAA CCTGGTTGTA CCGAGTCACT TCTAATGTGT GTCTTGATGA AATGAGAAAA CGGAAACGTA AATCTTCAGT ATCTTTAGAT TCGCCTATGG AAACTGATGA TGGGGAATTG TATTTTAATT TACCTGATCA AAAATTCAAT CCGGAATTAA TGGCAGAGCG TAAGGACGTT CAAGAAATTG TACACAAAGC TATTCAAGAA CTACCAAAAG ATCAAAAGTT AACATTGCTT TTACGAGAAA TGGAAGGTTT TTCATATGAC GAAATGGCAG AGGTGATGAA TGTTTCCGTG GGAACTGTCA AGTCGCGTTT GAGTAGGGCT AGAAACAATT TAAAGGAAAT CTTAGTCCAA AAAACGGAAC TTTTTCCAGA TAAATCACAT CTAAAGGGTA AGGAGGTGTA A
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Protein sequence | MTIMKSNDEF LVKQCQNGHL DAFEELVHKY HQKVYSLCYR FSGNHDDAND LAQEAFIRVY HSINKFHFKS AFSTWLYRVT SNVCLDEMRK RKRKSSVSLD SPMETDDGEL YFNLPDQKFN PELMAERKDV QEIVHKAIQE LPKDQKLTLL LREMEGFSYD EMAEVMNVSV GTVKSRLSRA RNNLKEILVQ KTELFPDKSH LKGKEV
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