Gene Nther_1884 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1884 
Symbol 
ID6315034 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1973138 
End bp1974007 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content39% 
IMG OID642644266 
Product3-keto-5-aminohexanoate cleavage enzyme 
Protein accessionYP_001918044 
Protein GI188586499 
COG category[S] Function unknown 
COG ID[COG3246] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.0818534 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGATA GACTAAATAT TTTCAATAAT ATTAATAGAA AAGGTGGTGT TAAGATGGAA 
AAATTGATTA TTACTGCTGC AATTTGTGGA GCTGAAGTAA CAAAAGAAGA CAACCCTAAT
CTCCCAATTA CAGCAGAGGA ACTAGCGGAA GATGCAGTTA AAGCTGAAAA AGCAGGGGCT
TCAATTATCC ACCTGCATGT TAGAGATGAA GAAGGCAATC CTACACAAGA TGGCGAAGTA
TTTAAAAAGG CCATTGACGC AATGAAGGAA CGTGGTGTTT CAGCAATTAT CCAGCCATCA
ACAGGTGGAG CAGCTGGGAT GAGCTTTGAA GAAAGGGCTC AGCCGATAGA ATTAAAACCT
GAAATGGCCA CTTTAGATTG TGGTACAACA AATTTCGGTG ACGCGATATT TGTAAATGAT
TTGCCCATGA TGAGAGAATT TGGTAAGGAG ATGAAAAGGC TAAATATATT ACCAGAGTTA
GAATGTTTTG AACCTGGACA TGTTTACAAT GCACTTCAGT TAGATAAGGA AAATTTGTTA
CCTAACCACT TGCACTTTGA CATGGTCTTA GGGGTACCTG GAGCGATGAA AGCTTCTTTA
AAGAATTTAA TGTTTATGGT AGATCTTTTA CCTGAAGGTT CAACTTGGAC AGTGGCTGGT
GTAGGAAGGC ATGAACTGCC ATTAGCTACT CATGCTATTT TGATGGGTGG TCACGTAAGA
GTAGGGTTTG AAGATAATAT TTACTATAAA AAAGGAGTAC TGGCAGAAAG TAATGCCCAG
CTGGTGGAAA GAATAGCTCG ACTTGCTGAA GAACTTGGAA GAGAAGTGGC TACTCCAGAT
GAGGCTAGAG AGATTCTAAA GATTAAATAA
 
Protein sequence
MPDRLNIFNN INRKGGVKME KLIITAAICG AEVTKEDNPN LPITAEELAE DAVKAEKAGA 
SIIHLHVRDE EGNPTQDGEV FKKAIDAMKE RGVSAIIQPS TGGAAGMSFE ERAQPIELKP
EMATLDCGTT NFGDAIFVND LPMMREFGKE MKRLNILPEL ECFEPGHVYN ALQLDKENLL
PNHLHFDMVL GVPGAMKASL KNLMFMVDLL PEGSTWTVAG VGRHELPLAT HAILMGGHVR
VGFEDNIYYK KGVLAESNAQ LVERIARLAE ELGREVATPD EAREILKIK