| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_1848 |
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| Symbol | |
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| ID | 6315284 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010718 |
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| Strand | + |
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| Start bp | 1926351 |
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| End bp | 1927625 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 642644226 |
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| Product | putative sigma54 specific transcriptional regulator |
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| Protein accession | YP_001918008 |
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| Protein GI | 188586463 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.0157719 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGGAAAGC ATTTATTAGA AGTTTATCCA TGGTTGACTG AGAAGACTAG TACAGCTTTA
ACGGTTTTAA GAACTGGACA AGCCATTATT AATCAACCTC AAGTTATGGA ACTCAGTGAT
GGGACAAATG TCAATTCAAT AAATACGGCC TTCCCTCTCA AAAATAAAGA CGGAATCCTC
GGAGTGGTTT TTTTATCAAA CAATATCAAC ACTATTAACA GTACTTCGGG ATCAAACTAC
ACCAAGCCAA AAAGACAGAG GCTCGGTGCC AAGTACACCT TTGACGATAT AATTACTCAA
AATGAAGGAA TTTTAAATAT TATTAACAAA TTAAAAAAGG TTTCCAGGAA TAATTCTAAT
ATATTTATCT ATGGTGAAAC CGGAACAGGT AAAGAGCTAT TTGTTCACGC AATACACAAT
GCCAGTAATC GAGCTAATAA GCCTTTTATA TCTCAGAACT GTGCTGCTAT TCCAGAATCT
TTGATGGAAA GTTTGATTTT TGGTACCACT GCAGGTAGTT TTACTGGCTC CACAGATAAA
AAGGGTTTAT TTGAACTGGC AAACGGTGGG ACAATATATT TGGATGAAAT CAATTCTATG
CCCTTAACAC TTCAATCAAA ACTATTAAGG GTTCTAGAAG ATGGCAAGGT TCGTAGAATT
GGGGGCAAAA CCGAATATGA AACAGATGTC AGGATAATTG CCTCTACAAA TGAAGCTCCC
GATTATTTGC TAAGAACTAA TAAACTTAGA GAGGATTTAT TTTACAGACT TAGTGTAGTC
AATGTCGAAA TTCCTCCTTT AAGGGAACGA AAAGATGATA TAGAATACCT ATATGATTTT
TTTATTAAAG ATTTTAACGC TACTTTCGGA GAACATGTTG ACGGAATAGA TAGTCAAGTT
AGACACATCT TTATGGACTA TGATTGGCCC GGTAATATTA GAGAGTTAAA GAACTGCATA
GAAGGCGCCT TTAACAGTGT GGAAGGTACT ATCATACAGT TAAAAGACAT GCCCAGTTAT
ATCAGTAAAA AAGCAAGATC CTGTGCCGAA AATTCTAAAA ACCAATGCGA TAGTAACATT
CAAGACCGAA TCAATGAGAA CTTTCTCTCT CACAATGAAT TATCGTTAAA AAAGAATCAG
GAAACCTTGG AGAAAAACTT GATAAAAAAA GCACTCAAGG AATCAAAAAA CAATATTACT
CAAGCTGCTA AATTACTAGA AGTTCCGAGA CAATCTGTTT ATAATAAAAT CAAAAAATAC
AATATTGAGC TATAG
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| Protein sequence | MGKHLLEVYP WLTEKTSTAL TVLRTGQAII NQPQVMELSD GTNVNSINTA FPLKNKDGIL
GVVFLSNNIN TINSTSGSNY TKPKRQRLGA KYTFDDIITQ NEGILNIINK LKKVSRNNSN
IFIYGETGTG KELFVHAIHN ASNRANKPFI SQNCAAIPES LMESLIFGTT AGSFTGSTDK
KGLFELANGG TIYLDEINSM PLTLQSKLLR VLEDGKVRRI GGKTEYETDV RIIASTNEAP
DYLLRTNKLR EDLFYRLSVV NVEIPPLRER KDDIEYLYDF FIKDFNATFG EHVDGIDSQV
RHIFMDYDWP GNIRELKNCI EGAFNSVEGT IIQLKDMPSY ISKKARSCAE NSKNQCDSNI
QDRINENFLS HNELSLKKNQ ETLEKNLIKK ALKESKNNIT QAAKLLEVPR QSVYNKIKKY
NIEL
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