| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_1844 |
|---|
| Symbol | |
|---|
| ID | 6315671 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010718 |
|---|
| Strand | - |
|---|
| Start bp | 1921267 |
|---|
| End bp | 1922466 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 642644222 |
|---|
| Product | L-aspartate aminotransferase |
|---|
| Protein accession | YP_001918004 |
|---|
| Protein GI | 188586459 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.716649 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 0.149603 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTATCTG ATAAAGCAAA ACAAATAACT CCTTCACCAA CTTTAAGTAT TAATGCAAAG
GCAAAGGAGC TTAAGAACCA AGGTATTAAT GTAATTAGTT TCAGTCAGGG TGAACCGGAT
TTTAATACTC CTGATCATAT AAAAAAAGCT GCTATCACAG CGATTGAGGA TAATTTCACC
CGTTATACAC CGGCTAGTGG AATGATAGAA TTAAAACAGG CAATTTCTGA AAAATTTCTT
AGAGACAATG ATTTAAGTTA TGACCCAAAT CAAATAATTA TTTCTAATGG TGCTAAACAT
GCCTTGTTAA ACGTTATGAC TGCAATTTTG AACATTGGTG ATGAGGTTTT AATACCAACA
CCCTATTGGG TAAGTTATCC TGAACTTGTA AAACTTGTTG ACGGGTGTCC CGTTCCAGTT
AAAGCTAGTG CTAGCAATAA TTTTAAAGTC ACTCCAGAGG ATCTAAAAAA ATACTTGAGT
TCAAAAACTC GTGCAATAAT TATAAATACA CCTACAAACC CGACTGGTCA GATTTATTCT
CAAAAAGAAT TAGAAAAGAT AGGTGAATTT GCCTTAAATA ATGGTTTGTA TATTATATCG
GATGAAGTTT ATGAATATAT GTCTTATAAC GGTCAACAAC ACATCAGTAT TGCTTCACTT
AGTGAAGAAC TTAAACAACA AACAGTTGTT TTGAATGGCG TTTCAAAAAG TTATGCTATG
ACTGGTTGGA GAATAGGGTA CTCAGCTGCT CCGAAAGAAC TGGCTCATGG GATGAGTGCA
ATTCAAAGTC ATGGGACATC TAATCCATCT TCCATTTCTC AAAAGGGAGC CCTAGCAGCT
ATACGGGGAC CTCAAAACTG TGTCAATGAA ATGGTTGCCC AACTTGATGA ACGTAGAAAG
TTCATGTATG AAAGATTATC TCAAATTCCT GGATTCCAGG CTTTAGAACC AGTAGGGTCA
TTTTATTTAT TTGCTAGTGT ACGAGAATTG ATTGGAAAAA GTTTAGATGA AAAAATTATT
AGGGATAGCC ACGATTTTGC AGAACTGTTA CTTGACAAGG AAAGTGTTAC AGTAGTACCG
GGTAATGGCT TCGGTTCTCC TGATCATATA AGAATGACTT TTGCCATGCC GATTGAAGAG
ATATCCCTAG GTTTGGACAG GATTGAGGAA TTTATTACAA AATTCAAACT TGCAGCTTAA
|
|---|
| Protein sequence | MLSDKAKQIT PSPTLSINAK AKELKNQGIN VISFSQGEPD FNTPDHIKKA AITAIEDNFT
RYTPASGMIE LKQAISEKFL RDNDLSYDPN QIIISNGAKH ALLNVMTAIL NIGDEVLIPT
PYWVSYPELV KLVDGCPVPV KASASNNFKV TPEDLKKYLS SKTRAIIINT PTNPTGQIYS
QKELEKIGEF ALNNGLYIIS DEVYEYMSYN GQQHISIASL SEELKQQTVV LNGVSKSYAM
TGWRIGYSAA PKELAHGMSA IQSHGTSNPS SISQKGALAA IRGPQNCVNE MVAQLDERRK
FMYERLSQIP GFQALEPVGS FYLFASVREL IGKSLDEKII RDSHDFAELL LDKESVTVVP
GNGFGSPDHI RMTFAMPIEE ISLGLDRIEE FITKFKLAA
|
|---|
| |