Gene Nther_1840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1840 
Symbol 
ID6315667 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1915914 
End bp1917362 
Gene Length1449 bp 
Protein Length482 aa 
Translation table11 
GC content34% 
IMG OID642644218 
ProductPAS/PAC sensor hybrid histidine kinase 
Protein accessionYP_001918000 
Protein GI188586455 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase
[COG0784] FOG: CheY-like receiver 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value0.366501 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGTTGATA ATAGACCAAT AGCAACTTAT GTAAGCCAAA ATATTAAAAA TATTCTCGGT 
TATGATCCCG ACAAATTTTT GGGAAAAATG GACTATTTTT GGAAAAAATT AATCCACCCC
GAAGACATAG ACAATATAAA AATAGTAGGT CAGATCGGTG AAGAAATTAT TAATGAATAT
AGAGTGAAAG ATCGTAGAGG TGAATATCAT TGGATTTACT CTCAACATAA AATTATGGAA
AATGATGAAT GTGGGTTAGA GGCAATCGGA TCTTTTTGGG ACATTACCGA GCGCAAACAG
GCTGAAGAAC AACAGCGGAT GATAGATAAA ATTGACACAA CTGCATTAAT GGCAGGTGGG
ATTGCCCATG ACTTTAACAA TATCCTTACT ATCTGTAAAG GGAATGTATC TTTAGCTAAA
TTTTATTTAA AATCATTAGG AGACAAACCT TTAAAAACAA TCAAGTTGTT AGAAGATGCC
GAACAAAGCT TTGATCAGGC GGGATATTTA ACTCATCAAC TATTGACATT GTCTAAAGGT
GATTCACCTG TATTAAAAGC AACCAGTCTA AAAAATTTAT TGACTGAGTC GGTTTATTTT
GCATTAAGAG GATCAAAAGT AGACTGTCAA TGGGAAATAG AAGAGAATTT ATATCCTGTG
GAAGTTGACG AAGGACAAAT AAATCAAGTA ATCAATAACC TAGTTATCAA TGCTATTCAA
TCTATGCCTG AAGGAGGCAC CTTAACTGTC AGAGCACAGA ATATTACTTT CCATGGACAG
AATCCCAAGA TTCCCTTAGA AAAAGGAGCT TATGTTAAAG TATCATTTGC AGATCAGGGG
TGCGGGATAT CAGATGAAGT TATTGAAAAA ATATTTGATC CATATTTTTC AACTAAGAAA
CATGGTCGTG GTTTAGGCTT GGCTACTAGT TTTTCAATAA TAAATAAGCA TGGAGGTTAC
ATAACTGTAG ATTCGAAAGA AGGAGTAGGA ACAACTTTTC ATATTTATTT ACGAGCTTCT
ACTAAAAAGA TGGTTAAAGA GGAAAGCAAT ATCCCCAAGG AGATTTATAA TAGTATGCAA
ACAAATAAAA AAGTTCTCAT AATGGATGAT AAAGATAAAG TACGGCGGGT TTTTTACGAA
TTACTAACAT CTATGGGATT TGATGTAACA TGTACACGAA ATGGGGAAGA AGCTGTAAAC
ATATATAAGC AAGCAAATAA ATCATTTGAT ATTGTCTTTT TGGACCTGAC AGTTCCTGGT
GGCATGGGTG GTAAGGAAAC TATTAAAAAA CTTAAGGCCA TGGACCCAAG TGTAACTGCA
ATAGCCGCTA GTGGTTACAG TGAAGATCCG ATACATTTAA ATTATTCAGA TTATGGTTTT
GCGGCCGCCA TAACCAAACC CTTCAGTATG GCAGAATTAC ATAAAGTATT ACATTCAGTG
ATATGTTAA
 
Protein sequence
MVDNRPIATY VSQNIKNILG YDPDKFLGKM DYFWKKLIHP EDIDNIKIVG QIGEEIINEY 
RVKDRRGEYH WIYSQHKIME NDECGLEAIG SFWDITERKQ AEEQQRMIDK IDTTALMAGG
IAHDFNNILT ICKGNVSLAK FYLKSLGDKP LKTIKLLEDA EQSFDQAGYL THQLLTLSKG
DSPVLKATSL KNLLTESVYF ALRGSKVDCQ WEIEENLYPV EVDEGQINQV INNLVINAIQ
SMPEGGTLTV RAQNITFHGQ NPKIPLEKGA YVKVSFADQG CGISDEVIEK IFDPYFSTKK
HGRGLGLATS FSIINKHGGY ITVDSKEGVG TTFHIYLRAS TKKMVKEESN IPKEIYNSMQ
TNKKVLIMDD KDKVRRVFYE LLTSMGFDVT CTRNGEEAVN IYKQANKSFD IVFLDLTVPG
GMGGKETIKK LKAMDPSVTA IAASGYSEDP IHLNYSDYGF AAAITKPFSM AELHKVLHSV
IC