Gene Nther_1794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1794 
Symbol 
ID6315257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1858876 
End bp1861038 
Gene Length2163 bp 
Protein Length720 aa 
Translation table11 
GC content31% 
IMG OID642644168 
ProductSpoIID/LytB domain protein 
Protein accessionYP_001917954 
Protein GI188586409 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG2385] Sporulation protein and related proteins 
TIGRFAM ID[TIGR02669] SpoIID/LytB domain 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.00160859 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGGTTAGAA CAACTAGTTT GATCACTTTA ATTTTATTAT TTTCTATTGT ATTTATAGGT 
CTAAATTATG ATGTATCGGT ATCTGCTGAT AGTCCAGGAA TTACATCAAA TTTGGATGAA
GTTGAGGTCG GAATACTTCA CAGGGAAGAT GATTTGGAAT CAAGTATAAA GCTTGAGCCC
GTTTACAACA ATACAGACTT AGAAATAAAA TTGAACGGAA CTGCTATACC AGTTTCTAAT
GGTGCAGATG GTGTAAATAT TGAGAAAAAA AGTAATCGAT TACTAATTAA TGGTGAAACT
ATCGATGAAT TCAATCAAGG GAGCTCAATT TCAATTACTT ATCCAATGAA AATAGGCCCG
ATAAGTTCTA AACAAATAAG TGAACTAGAA TCAAAAGTAG AATCCCAAGA AGAAATAACT
AACATAACTA CTATTCAAGA GTCTGGTGCT AAATATTTAG AAATGGAGCT AACAGAACTT
GATGCAATAA ATTCAATCAT GAAAATTATA AATGATAGAT TATCTAAAAA AGGATATTCT
TATCAGGGTG ATTATTTAGT TATTTTAGAA AAAAGTCAAG ATAAACAAAT GATTGAACAA
CGTAAAGATG AATTTAATGA CTTAGATTCA TTGCATACAA TTTCTTTTGG TGATAAATGG
GCTCTTCTAA CTGAAATTGA TCAATTAACA ACAGCTTTTT CTTTGATCAA TAAATATGAT
ATAAATATGG ATGATTTCAA AATTTACGGT CCTGGATTTT ATAGGAATAA AGACAATACT
GAAGTGATTA CTATTGATAG ACCTGGTAAA ATATCAATTC TCTTGACAGG TGATTATTCG
GAAACAGAAT TAATGAAATT AAAAGAACTT ATCAGTGATA AAACTTTTCT TGAAACTAAT
TTAGTAAAAG AAGGTTCCAA AGGTCTATTA ATTGGAAGTT TTAATGAAAC AGTTGATGAA
TCCTTAATTA AAAATTATTT AACTGACCAC AAAGGTATAG CTAGTAAAAT TGGAGGAAAA
TACAGGACGG AATTTGCAAC TGTATCTTTG AAGGATTTTA CAGAAGGAAA TGATACATAT
CAGAAAAGTA GTTCACAGAA AGACTCTTCT CAGATAGAAG AAATTATAAT TCATGGTAAT
GGAAATCCAA TTGAACTTGA AAATAATAAT CGTTCTTATC GTGGTAAGAT GAAACTAAGA
CTTAAAGATA ACGGATTTAT GGTTACTAAT GTTGTGGGAT TAGAAGACTA TCTTAAAAGT
GTCGTTCCCT CAGAAACCTA TAGTTCCTGG GATATAGAAG CCTTAAAAGC TCAGGCCGTA
GCTTCTAGAA CTTATGCTAT TTATTCACAG CAAAACAACA ATTATAATGA TTTTGACTTG
ACTGATTGTC AAAATTCACA AGTATATAAA GGTTATCAAG CTGAAAATTC TAAAACTACA
GAAGCTGTTA ACAGTACAAT GGGAGAAGCA ATTTATTATA ATGGTGATGT GATAAATGCA
CTTTATCATT CTAACTCAGG TGGGAAAACT GAAGATCCTG AAAATGTATG GGGATCTGCT
ATTCCTTATT TAAGCTCAGT CGAAAGCTCA TGGGATGAAG AAGCTGAAGA TAGTAATTCT
GATATTTACA ATTGGGAAAA ACAGATTTCT CGAGAGAAAA TTTCTGAAAA GCTAAATGAA
GACTATGATT TAGGAGAATT AAAGGATATT GAGATATTAG AACGAACATC AGCAGGACGA
GTTAAAGAAT TAATTTATAG AGGGACAAAA GGTGAGGAAA AGATATTCGG AGATAAAAAC
AGAACCCCTA TGGGTTTGAA AAGTACTAAA TTCGAAAAAA CTTCTAATAG AGAAGATACA
GAAGTTTCTA TAAAAACAGG AACAGGTAGA CAAAAAAAAT ATGTAGAAAG AGATCAGTTA
TACGCTGTTT CCGCAGATAG TAGTATCCCT AAAGAAGTCA CAGAAAGTCA GCAAGAATAC
TATATAAAAA GTGGCAATGG AATAAGGGAG GTAAGAAAAA TTCTCCAGTT TACTTTTTCA
GGGAAAGGGT TTGGACATGG ATTAGGTATG TCCCAATGGG GTGCCCACGG AATGGCCCTT
GAAGGTTATA ATTACAGGGA AATTTTAAAC CACTATTACA GTGATCAAAT AATAATTGAA
TAA
 
Protein sequence
MVRTTSLITL ILLFSIVFIG LNYDVSVSAD SPGITSNLDE VEVGILHRED DLESSIKLEP 
VYNNTDLEIK LNGTAIPVSN GADGVNIEKK SNRLLINGET IDEFNQGSSI SITYPMKIGP
ISSKQISELE SKVESQEEIT NITTIQESGA KYLEMELTEL DAINSIMKII NDRLSKKGYS
YQGDYLVILE KSQDKQMIEQ RKDEFNDLDS LHTISFGDKW ALLTEIDQLT TAFSLINKYD
INMDDFKIYG PGFYRNKDNT EVITIDRPGK ISILLTGDYS ETELMKLKEL ISDKTFLETN
LVKEGSKGLL IGSFNETVDE SLIKNYLTDH KGIASKIGGK YRTEFATVSL KDFTEGNDTY
QKSSSQKDSS QIEEIIIHGN GNPIELENNN RSYRGKMKLR LKDNGFMVTN VVGLEDYLKS
VVPSETYSSW DIEALKAQAV ASRTYAIYSQ QNNNYNDFDL TDCQNSQVYK GYQAENSKTT
EAVNSTMGEA IYYNGDVINA LYHSNSGGKT EDPENVWGSA IPYLSSVESS WDEEAEDSNS
DIYNWEKQIS REKISEKLNE DYDLGELKDI EILERTSAGR VKELIYRGTK GEEKIFGDKN
RTPMGLKSTK FEKTSNREDT EVSIKTGTGR QKKYVERDQL YAVSADSSIP KEVTESQQEY
YIKSGNGIRE VRKILQFTFS GKGFGHGLGM SQWGAHGMAL EGYNYREILN HYYSDQIIIE