Gene Nther_1790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1790 
Symbol 
ID6315253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1855615 
End bp1855887 
Gene Length273 bp 
Protein Length90 aa 
Translation table11 
GC content35% 
IMG OID642644164 
Productpreprotein translocase, YajC subunit 
Protein accessionYP_001917950 
Protein GI188586405 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1862] Preprotein translocase subunit YajC 
TIGRFAM ID[TIGR00739] preprotein translocase, YajC subunit 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0000167941 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.00454541 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCAGAAG TAGTGGGTTC GTTTTTACCG CTGATTATTT TAATTGCAAT TTTTTACTTC 
TTGCTTATCA GACCACAACA AAAGCAGCAG CGAGAAAGAC AGGAAATGCT TGATAATTTG
AAAAAGAACG ATAAGGTGAT TACCATTGGT GGAATTCATG GTACCATCAA AGATATCAAA
GAGGATCAGC TAACTTTAAA AATTGCGGAA AACTTATCTA TAACCATGTC TAAGTTCGGG
ATCCAATCAG TGGTTAATGA CGAAAACAAA TAA
 
Protein sequence
MPEVVGSFLP LIILIAIFYF LLIRPQQKQQ RERQEMLDNL KKNDKVITIG GIHGTIKDIK 
EDQLTLKIAE NLSITMSKFG IQSVVNDENK