Gene Nther_1781 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1781 
Symbol 
ID6316429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1848897 
End bp1850003 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content33% 
IMG OID642644155 
Productprotein of unknown function UPF0118 
Protein accessionYP_001917941 
Protein GI188586396 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.836553 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.00769603 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGATTTTG AAGATAGAAG ATGGATGAAA AAAATTGGTC TGGCGACAAC ATCGGTTTTG 
ATTGTAATAA TAATTTTCGC GGTACTATAT TGGTTATTAT CTACAGCAGT TATTTTACGA
AGTCAAATAA TTAACTTTCT ATTACCCTTT CTGTTTGCCT TTGTTGTTGC CTATATTTTA
AAACCAGCTG TAGACTATAT GGAAGAGAAC AAAATCCCTA GGATTTTAGC CATATTGATT
TTATACGCAA TAATTGGCAG TTTTCTAGTT TTTGTTGGTG GTAGAGCTTT TGCAACTATT
GTCAATGAAG TGCAAAAATT AATTTCTATA GCTCCACAAT ATGCTAGAGA CATACAATTC
TTTTTAATGG ACCTTGAATT GTGGATTGAA AGACACGATT TGCCAATTAT GGTAACAGAG
ACAATTAGGG AAAATATTGC TGAAGCTGAG ACCGAACTAA CGGAATATTT GGATAGAATA
GTTGATGTAG AGAGTTTACT GGCATTTGCA TTGAATATCT TTGGGCATTT CTTGAGCTTA
GTTGCTTTTC CAATTATTTT ATTCTATTTC TTAAAGGATA CTGATTTAAT CAAGAAAAAC
CTGAGTTTCT TAATTCCTGG AAGATTTCGT AAAAGGTTTT TATTTGCTTT TAGGGATATT
AATAGAACAA TTGGAGCTTA CATTAGAAGC CAAATCATTA TCTGTGGATT TATAGGGCTA
TTGACTTACT TGGGATTAAT GATACTCGGA GTTGATTTTG CCTTAGTTTT AGGAATTTTT
GCGGGTATAA CTAATATAAT TCCCTACTTT GGGCCATTTA TTGGCGCTAT ACCTTCAACA
GTAGTTGCTC TATTACAGAC TCCAACTCTG GCTATAAAAG TTATTATTCT GATAACTATT
ATTCAACAAA TTGAAAGTCA AATAGTTGCA CCACAAGTTT TTGGAAAAAA TCTAGCAATT
CATCCTCTAG CAGTAATAAC TGTTTTAATA GCTGGTGGAC AATTTTTTGG TATTTTGGGA
ATGATTTTAG CTGTACCAGT TTTAGCTATA ACTAGAGTAG TAGTAAGGCA CTTGGCTTTC
GATTTTTGGT TAGCCGAAAA AGAGTGA
 
Protein sequence
MDFEDRRWMK KIGLATTSVL IVIIIFAVLY WLLSTAVILR SQIINFLLPF LFAFVVAYIL 
KPAVDYMEEN KIPRILAILI LYAIIGSFLV FVGGRAFATI VNEVQKLISI APQYARDIQF
FLMDLELWIE RHDLPIMVTE TIRENIAEAE TELTEYLDRI VDVESLLAFA LNIFGHFLSL
VAFPIILFYF LKDTDLIKKN LSFLIPGRFR KRFLFAFRDI NRTIGAYIRS QIIICGFIGL
LTYLGLMILG VDFALVLGIF AGITNIIPYF GPFIGAIPST VVALLQTPTL AIKVIILITI
IQQIESQIVA PQVFGKNLAI HPLAVITVLI AGGQFFGILG MILAVPVLAI TRVVVRHLAF
DFWLAEKE