Gene Nther_1767 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1767 
Symbol 
ID6314288 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1833354 
End bp1834553 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content34% 
IMG OID642644141 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_001917927 
Protein GI188586382 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value0.18145 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAAACTA TAAGTGCAAT TAAAGTAGCA ATTTTGTCCG CTTCAAATTA TATAACAGTC 
CTAGTAAATA CAGTACTATT TCCTATTTTC CCTGTCATGG CACAGGCTTT AAATTTAACT
TTAAGAGATT TAGCAATCTT AGTCGGTATA GTTTCTTTTC CATCAGCCCT AATTAATTTA
GGAGGTGGGA TATTAGCAGA TAGATTCGGA AAAAAAATAA TTATTGTATT ATCCTTAACA
TTATATGGGC TTGGGGGGTT ATTAGCTGGA CTAAGTATTA TATTAATGGA AGAACCTTAT
CCGGTAATTT TAGTTGGTAG GCTATTTCAA GGAATAGGTG CGGCAACACC CATGTTTTTA
TCAGTAGCAC TGGTTGGCGA TATTTTTCAA AGCTTAGAAA GAAGTAAAGC TTTGGGTTTT
TTAGAAACGG CTAACGGATT AGGGAAAGTT ACTAGTCCAA TTTTAGGTGC TTTAATTGGT
CTTATTACAT GGTATTCCAT ATTTTTTATT TATCCAATTG TGGCTTTACC GGTTGCTATT
GCAACCTGGA AAGTTATAGA GGAACCTAAT GAGAATAAAG GGGTAGATTG GGAGAAACAG
AAAAAGGCTT TTCGTCAATT TAAAGATGAA TCCAGAATTA TCACTTTGCT CGTGGCTTTT
TTGGTAATAT TTATTTTAAT TGGTACCATG TTTTGGTTGA GTGATTTTTT AGAAGCTAGA
CTAGAACTAA ATCAGATTTT AAGGGGAGTT GTTATATCCT TACCAGCTCT AGCTATGTTA
CTTACCACAT TATTTGCTGA AAGAATACAT AATAAGTTGA ATCCTCGCTT TATTATGGGG
GGTGGTCTTA TATTAACATC AGCTTGTTTA ATTGGTATTT ACCATACCTT AGAAACGATT
TTATTTTGGC CATTAATAGT AGCTTTAGGT GTGGGGGCAG GAATTGTATT GCCTTCTGTT
GACATGGTGA GTACTTCAGT AGAAATTAAA GAAATTAGAG GAGTTATGAG TACAATATAC
GGATCTGCTC GATCTTTGGG AGGAGCAACT ACAACTATTA CATTCTCTTA CTTGTTGGAA
TACGGATTAC AATTAACATT TTATAGTATA GCAGTGGGAG GGATAATAGT TGGTTTAATT
GTATTATTTA GAATGAATGA AAAAAAATTA TTGCCCAAAG AACTGTTACC GGATAAGTGA
 
Protein sequence
MKTISAIKVA ILSASNYITV LVNTVLFPIF PVMAQALNLT LRDLAILVGI VSFPSALINL 
GGGILADRFG KKIIIVLSLT LYGLGGLLAG LSIILMEEPY PVILVGRLFQ GIGAATPMFL
SVALVGDIFQ SLERSKALGF LETANGLGKV TSPILGALIG LITWYSIFFI YPIVALPVAI
ATWKVIEEPN ENKGVDWEKQ KKAFRQFKDE SRIITLLVAF LVIFILIGTM FWLSDFLEAR
LELNQILRGV VISLPALAML LTTLFAERIH NKLNPRFIMG GGLILTSACL IGIYHTLETI
LFWPLIVALG VGAGIVLPSV DMVSTSVEIK EIRGVMSTIY GSARSLGGAT TTITFSYLLE
YGLQLTFYSI AVGGIIVGLI VLFRMNEKKL LPKELLPDK