Gene Nther_1742 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1742 
Symbol 
ID6317223 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1807776 
End bp1809164 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content39% 
IMG OID642644118 
Productprotein of unknown function DUF107 
Protein accessionYP_001917904 
Protein GI188586359 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1030] Membrane-bound serine protease (ClpP class) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.0102804 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGTCT GCTCCAAAAA AAACCTTAGG TTTTTAAAAG TAACATCTAT TTTGGTAATC 
TTGGTTTTTT TATTAAGTGC AATACAAATG CCTGTAAGTA GTGAAGAAAA CAATTCTGAC
CCCAAATATA AACTATTAAC TGTTGAGGAC ACAATTACAG CAGGCACTAG TCAATATCTG
GAGCAAGGAA TTGAAAATGC CATAAACCAA GGATATGACG GGGTGATTAT AGTCCTAAAT
ACTCCCGGGG GGCTTGTTGA TGCCACCTTA GATATTATGG GTAAAATAGT TAATTCTCCT
ATACCTGTAA TCACCTTTGT AAGTCCTTCA GGAGCCATAG CTGCTTCGGC TGGTACTTTT
ATTTTAGTTA GTGGGCATGT GGCAGCTATG ACACCGGGAA GCACTTGTGG CGCTGCTATG
CCAGTGACTA TGCAGCCGGG GGAAGAGGGG ACACAAGAAG CGGATCAAAA AACCATTAAT
TTTTTGGCCG GTCACTTAAA AAGTGTTGCC AGGGAACAGG GTCGACCTGA AGAAGTTGTC
GAGAAATTTG TAACTGAAAA TTTAACTCTG AATGCATCGG AAGCTTTGGA GAAGAATGTA
ATTGAATTCA ATGAACCAAA TTTAGATGCT TTATTAACCG CTATCCATGG TCATGAAGTT
ACTGTAGCAG GTGAGGAAAT CACCTTAGAA ACTGAAAACG CCAGGATAGA TGAAGCTGAA
ATGACTTTTA CCCAACAGTT GAGTCACTTT ATCAGCAATC CTCAAATAGC ATTAATACTA
TTTATGATCG GTATTTATGG AATTATTTTT GGTATCAATA TGCCTGGGAC AATTATACCA
GAACTTGGGG GAGTCCTTTC ACTAATTTTG GCTTTATTTG GTCTAGGTAT GTTTGAAGCA
AATACCCTTG GCATTATCTT AATTGTATTA TCAGTAATTT TATTTATAGC TGAGGTATTC
ACACCAACTT TCGGTATATT AACTACCGTT GGTGTTATTG CATTAGTCAT AGGTGGCTTC
TTCTTGCCAG TTGAACCCAT GCTCCCTCAA GCATGGTTTG ATGCTTTTCA AATGACTGTC
ATAGGGATGG CTTTGGTAAC TGCAGGTTAT CTGGCTTTGG TTATAATGAA ACTACTTAAA
ATACGTAAAC AGTCTGCTGT ACACAAAAAG CATGGAATGA TCGGTTATCG TGGCAGGACA
ACAGAAGATT TGAATCCAGA AGGTTATATT AAAATTCGCG GTGAATTGTG GCGAGCCAAA
AGCAAAGATG AGGAATTTAT AGCGAAGAAT AGAGATGTAA TAGTAGAACA AGTTGAGGGG
ATTAAACTGA TGGTATCTGA AACAAAAAGG AGTGACCAAG AGGAGACGGA AAAAGAAGTT
GAGGAGTAA
 
Protein sequence
MDVCSKKNLR FLKVTSILVI LVFLLSAIQM PVSSEENNSD PKYKLLTVED TITAGTSQYL 
EQGIENAINQ GYDGVIIVLN TPGGLVDATL DIMGKIVNSP IPVITFVSPS GAIAASAGTF
ILVSGHVAAM TPGSTCGAAM PVTMQPGEEG TQEADQKTIN FLAGHLKSVA REQGRPEEVV
EKFVTENLTL NASEALEKNV IEFNEPNLDA LLTAIHGHEV TVAGEEITLE TENARIDEAE
MTFTQQLSHF ISNPQIALIL FMIGIYGIIF GINMPGTIIP ELGGVLSLIL ALFGLGMFEA
NTLGIILIVL SVILFIAEVF TPTFGILTTV GVIALVIGGF FLPVEPMLPQ AWFDAFQMTV
IGMALVTAGY LALVIMKLLK IRKQSAVHKK HGMIGYRGRT TEDLNPEGYI KIRGELWRAK
SKDEEFIAKN RDVIVEQVEG IKLMVSETKR SDQEETEKEV EE