Gene Nther_1740 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1740 
Symbol 
ID6317221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1805911 
End bp1806681 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content36% 
IMG OID642644116 
ProductSPFH domain, Band 7 family protein 
Protein accessionYP_001917902 
Protein GI188586357 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.0109204 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTTAATT TTTTAGCAAT AATCTTAGTT TTACTGCTAG TCTTAACTTT ACTTGGCATG 
GCAGTAAGAA TTTTCGCTGA GTACGAACGA GGAGTGACCT TTCGCCTGGG AAGATTTGTA
GGAACAAAAG GACCTGGTTT AATATTTATT ATTCCATTTA TAGATAGAAT CGAAAAAGTA
TCATTACGGA CTGTAGTTTA TGACGTGCCG GTCCAAGAAG TAATTACTAA AGATAATGTA
ACTTGTAGAG TGAACGCTGT TTTGTACTAT CGGGTGGTAG AACCTAAAAA TGCTGTAATT
AATGTTCAAA GATTTCATGA GGCAACTATT CAACTATCTC AAACTACATT GCGCAGTGTG
GTAGGAGACG CTGAATTTGA TGAATTACTT TCAGAAAGAG AAAAGTTAAA TCAAAAATTG
CAACAGATTA TTGATCAGGC TACTGATCCC TGGGGAATTA AAGTCACTAC CGTTGAAATT
AAAGATGTCA CTATCCCAGA TAGTATTCAA AGGTCTATTG GAAGGCAAGC CGAAGCTGAA
CGAAGAAGAA GGGCAGTTAT AATTCAAGCT GAAGGAGAAA AACAAGCAGC TAAGGAATTA
GCAGAAGCGG CTGATATATT ATCTAAACAA AAAGGTGGTT TAACGTTAAG GTCATTAAGA
ACTGCTCTTG AAATGTCTGC CGAAAAAGGT AATACCATTT ATTTTCCCTT TCCTATGGAA
TTTACTAGTT TAATGAATTT AATAGGCGGG GAAGAAAACG AAGAAAAATA G
 
Protein sequence
MLNFLAIILV LLLVLTLLGM AVRIFAEYER GVTFRLGRFV GTKGPGLIFI IPFIDRIEKV 
SLRTVVYDVP VQEVITKDNV TCRVNAVLYY RVVEPKNAVI NVQRFHEATI QLSQTTLRSV
VGDAEFDELL SEREKLNQKL QQIIDQATDP WGIKVTTVEI KDVTIPDSIQ RSIGRQAEAE
RRRRAVIIQA EGEKQAAKEL AEAADILSKQ KGGLTLRSLR TALEMSAEKG NTIYFPFPME
FTSLMNLIGG EENEEK