Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nther_1739 |
Symbol | |
ID | 6317220 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
Kingdom | Bacteria |
Replicon accession | NC_010718 |
Strand | + |
Start bp | 1805130 |
End bp | 1805795 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 642644115 |
Product | isochorismatase hydrolase |
Protein accession | YP_001917901 |
Protein GI | 188586356 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.0101718 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGTTTC TAAAGGAACA GTTAGGCGAT TTACCTGTAA TAAATAAACA ATTTTCACAA ATCACTTCAC AAAACAGTGC ATTAATTATA GTTGACATGC TAAATGGTTT TTGTAATATG GGAGCTCTTC AAAGTCCTCA TAATGACAGC TTAAAAGAAC CAATAGCTAA ATTAGTATCT CAGTTTAAAG GACCAATATT ATCAGTTCAA GACTCTCATT CAGAGTCAGA TGATGAATTC GAAGCTTTTC CACCTCATTG CCTTGCTGAC TCTCATGAAT CCCAGCTAGT CGAACCTATT AAATCTCAAA TAGAATCACA TCATGACTCT GAAGTTTTAC CTAAAGCTAC ATTAAGCCCG TTTTTTGGGG CTTCAGGTTA TACCCAGTGG TTATCGCAAA TTTGGGAGAA GGGAGTTACA GATATTTACA TAGTAGGTAA CTGCACCGAT TTATGTGTTT ATCAAACAGC CATGGGAACT AAGCTCTGGA TGTCTGAACA GTCAAAAAAG GCTGATATAA ATGTAATTGT AGACATGGTA AACACTTACG ATTTACCTAA AGACCAGACA CCAAAAGGTG CTATCCCTCA CCCTAGGGAA GTCTTTCATA ATGTATTTCT GCATCATTTG GCTTTAAATG GTATCAAATT AATCAAATTG GAATAA
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Protein sequence | MEFLKEQLGD LPVINKQFSQ ITSQNSALII VDMLNGFCNM GALQSPHNDS LKEPIAKLVS QFKGPILSVQ DSHSESDDEF EAFPPHCLAD SHESQLVEPI KSQIESHHDS EVLPKATLSP FFGASGYTQW LSQIWEKGVT DIYIVGNCTD LCVYQTAMGT KLWMSEQSKK ADINVIVDMV NTYDLPKDQT PKGAIPHPRE VFHNVFLHHL ALNGIKLIKL E
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