Gene Nther_1739 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1739 
Symbol 
ID6317220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1805130 
End bp1805795 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content36% 
IMG OID642644115 
Productisochorismatase hydrolase 
Protein accessionYP_001917901 
Protein GI188586356 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.0101718 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGTTTC TAAAGGAACA GTTAGGCGAT TTACCTGTAA TAAATAAACA ATTTTCACAA 
ATCACTTCAC AAAACAGTGC ATTAATTATA GTTGACATGC TAAATGGTTT TTGTAATATG
GGAGCTCTTC AAAGTCCTCA TAATGACAGC TTAAAAGAAC CAATAGCTAA ATTAGTATCT
CAGTTTAAAG GACCAATATT ATCAGTTCAA GACTCTCATT CAGAGTCAGA TGATGAATTC
GAAGCTTTTC CACCTCATTG CCTTGCTGAC TCTCATGAAT CCCAGCTAGT CGAACCTATT
AAATCTCAAA TAGAATCACA TCATGACTCT GAAGTTTTAC CTAAAGCTAC ATTAAGCCCG
TTTTTTGGGG CTTCAGGTTA TACCCAGTGG TTATCGCAAA TTTGGGAGAA GGGAGTTACA
GATATTTACA TAGTAGGTAA CTGCACCGAT TTATGTGTTT ATCAAACAGC CATGGGAACT
AAGCTCTGGA TGTCTGAACA GTCAAAAAAG GCTGATATAA ATGTAATTGT AGACATGGTA
AACACTTACG ATTTACCTAA AGACCAGACA CCAAAAGGTG CTATCCCTCA CCCTAGGGAA
GTCTTTCATA ATGTATTTCT GCATCATTTG GCTTTAAATG GTATCAAATT AATCAAATTG
GAATAA
 
Protein sequence
MEFLKEQLGD LPVINKQFSQ ITSQNSALII VDMLNGFCNM GALQSPHNDS LKEPIAKLVS 
QFKGPILSVQ DSHSESDDEF EAFPPHCLAD SHESQLVEPI KSQIESHHDS EVLPKATLSP
FFGASGYTQW LSQIWEKGVT DIYIVGNCTD LCVYQTAMGT KLWMSEQSKK ADINVIVDMV
NTYDLPKDQT PKGAIPHPRE VFHNVFLHHL ALNGIKLIKL E