Gene Nther_1734 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1734 
Symbol 
ID6317215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1801182 
End bp1801694 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content35% 
IMG OID642644110 
Productintracellular protease, PfpI family 
Protein accessionYP_001917896 
Protein GI188586351 
COG category[R] General function prediction only 
COG ID[COG0693] Putative intracellular protease/amidase 
TIGRFAM ID[TIGR01382] intracellular protease, PfpI family 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.0443029 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGATA AAAAAGCTAT TGTTTTATGT GCAAATATGT ATGAAGAGAG AGAGTTATGG 
TATCCTTATT ATCGACTTCA AGAAGCTGGT TTAGAAGTAG AATTGGTTGG GGCTGAGGAA
GGAACATATA CAGGAAAAGC AGGTCTGCCA TGCAAGGTCG ACAAGCAAAT ATCCCAGATT
AATGCTGAAG AAGTAGATGC TGTAATAATA CCAGGTGGTT TTGCCCCAGA TAGCTTAAGA
AGAAATCAAC AAATTCTAAA TGTAATTAAA AAAGTAAATA ACAATGGAGG TTTAATTGCT
GCTATCTGCC ATGGTCCCTG GCTATTAGTT TCTGCTGATA TAATTTCTGG TAAACATATA
ACTTGTTTTT GGGCTATCAT AGATGATGTT AAAAATGCAG GTGCCCATTA TGAAGATCGT
GAAGTTATTA GAGATGGTAA TATAGTTACT TCAAGGATTC CTCATGATTT ACCGGAATTT
ATGAAAGAAT GTTTAACAGT ATTGCAAGAT TAA
 
Protein sequence
MQDKKAIVLC ANMYEERELW YPYYRLQEAG LEVELVGAEE GTYTGKAGLP CKVDKQISQI 
NAEEVDAVII PGGFAPDSLR RNQQILNVIK KVNNNGGLIA AICHGPWLLV SADIISGKHI
TCFWAIIDDV KNAGAHYEDR EVIRDGNIVT SRIPHDLPEF MKECLTVLQD