| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_1733 |
|---|
| Symbol | |
|---|
| ID | 6317214 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010718 |
|---|
| Strand | - |
|---|
| Start bp | 1799697 |
|---|
| End bp | 1800962 |
|---|
| Gene Length | 1266 bp |
|---|
| Protein Length | 421 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 642644109 |
|---|
| Product | amino acid permease-associated region |
|---|
| Protein accession | YP_001917895 |
|---|
| Protein GI | 188586350 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0833] Amino acid transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 0.0204884 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATAGTTG GAACAGTTGT TGGAGCAGGA ATTTATATTA TCATTGGCCC CTTAGCAGTT
TCAGTAGGAC CAGGCTTGAT GATATCGTAT TTAATTGCTC TGTTAATTGC AGCTGCATCA
TCCTTTTGTT ATGCTCAAGT GGCTGCTATT TATCCTACTA CAGCAGCTAC TTACAGGTAT
GCCAGAATGT TTTATCCTGA AACTATTGGA TTTTTAATGG GTTGGTTAAG GTTTATGACT
TCTTTTTACG GTTTAGCATT AATGGCTAGT GGTTTTACTG AGTACTTTGA TAGTCCCTGG
GGGATTGATA ATAGAATTAT TGCAGCTGTA ATTTTAACGA TTTTTTATGT AGTTAATGCC
TTTGGAATTA AAACCACCCA ACTGGTACAG AGTGTTTTAG TGACTATAGT AGTTGCTGGT
TTGATTGTTT TCTCTGGAGG AGGATTAGCT GAAATTAATT TGGATAACTT AACACCAATG
ACTGAAGCGG GTATGGGTAC AATTTTTGGT GGCGCATTAA CTGCTTTTTT TGCCTATACT
GGTATGTACT TTGTGGCTGA GATTGGCGAT GAAATTGAAG AATCAGATAA AAATATTCCC
AGAGCAATTA TTATTGCTTC AATAATAATT GGACTTTTGT ATTTAAGCAC TACTTTGGTG
TTTTCAGGAG CATTAGGTTG GGATACTATT AAGGCTGCTG AACCCAACTT AGCAGAAGCT
GCTCAAATTA TTTTCCCGGG ATGGACTTTT TATTTTATAC AGTTGAGTGG CGTAGTAGCT
GTAATTATGC CCATTAATTC AATTTATGCT GCCAGTTGTA GACTACTAGC TAGTTTATCT
GAAGACGGTT ATATGCCCGT AATTTTAGCT AAGAAAAACC GTTTTAATGT TCCTGGTATA
GCTTTGACAG TAATTTATAT TTTAGGGATA TTGATTGTTT CTCTAGATTT ATCAATTTTA
TATTTGGGAG CGATTAGTTC ATTAGTGACT TTAATTGGAA TGGCCTTGGT AGCTGGTGCC
GGGTTAAAGA TACTTGCCCA GGAGCCAGAT AAACTGAAAG AGGCACCTTT TACTCTTTCC
CCTCGAGTAA TGATAGGATT GGGAATATTC ACCATTATTG CAGTGATCTG TTTAGCGGTA
TTTTCTTTCA TGGAGGATCC TTTAATTTTG TATTCTTTAT TTATATGGAT TGGTTTGGGT
TTAATATATT TTAAAATTAG ACAATATTAT GCTAAAACAA AAGGCTATCA AAACTTTTAT
GGATAA
|
|---|
| Protein sequence | MIVGTVVGAG IYIIIGPLAV SVGPGLMISY LIALLIAAAS SFCYAQVAAI YPTTAATYRY
ARMFYPETIG FLMGWLRFMT SFYGLALMAS GFTEYFDSPW GIDNRIIAAV ILTIFYVVNA
FGIKTTQLVQ SVLVTIVVAG LIVFSGGGLA EINLDNLTPM TEAGMGTIFG GALTAFFAYT
GMYFVAEIGD EIEESDKNIP RAIIIASIII GLLYLSTTLV FSGALGWDTI KAAEPNLAEA
AQIIFPGWTF YFIQLSGVVA VIMPINSIYA ASCRLLASLS EDGYMPVILA KKNRFNVPGI
ALTVIYILGI LIVSLDLSIL YLGAISSLVT LIGMALVAGA GLKILAQEPD KLKEAPFTLS
PRVMIGLGIF TIIAVICLAV FSFMEDPLIL YSLFIWIGLG LIYFKIRQYY AKTKGYQNFY
G
|
|---|
| |