Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nther_1730 |
Symbol | |
ID | 6315061 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
Kingdom | Bacteria |
Replicon accession | NC_010718 |
Strand | - |
Start bp | 1795755 |
End bp | 1796966 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 642644106 |
Product | type II secretion system protein |
Protein accession | YP_001917892 |
Protein GI | 188586347 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1459] Type II secretory pathway, component PulF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.659448 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.0266314 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTAAAT ATTATTATAG AGCAAAAAGT TGGACAGGAG AAGAAATTAA GGGATTTATC ACTGCTGACA GTCGGGAAAC AGCCATATTA AATTTAACAA ATGAAAATTT TTGCTTAATT GAACTTAAAA ATTATTCAAA GCGAGATTCG TTATTCGAAT ATATCAGAAA ATTTTTAGAT CCAGTCACAT CTAAAGAATT AATGCTATTT ACTAGCCAAT TTTCCACAAT GGTTAGGTGT GGGATTCCTG TTATTGAAAG TCTTGACTTG CAAACACAAC AATTAGGAAA TAAAAATCTG ACCAGGGGAC TAACCATAGT AATAAAATCT CTAAACTCTG GTAAAAGTTT ACGAGAAGCT TTTTCAGATG CCAGTGAAAC CTTTCCATGG CTTATTACGG AAATGGTGGG AGCTGGAGAA GAATCGGGAC GCTTGGACGA AATTTTAGAT CGTTTGGCAT TACATTACGA ACAGGAATAT ACTTTATCTC AAAAACTAAA ATCTGCTATT AGTTATCCAA TTTTACTAAT CATATTAGCT ATGGTAGTAG TTTATATTTT ATTAACAGTA ATTTTCCCAC AATTTATCAA TTTGTTTGAA GCTCAGGGTG CAGAGTTACC TTTTATCACG AGAATGATTT TTGATTCAGG GATTTGGATG ACTGAAAACT TTTCACTTAT CTTTGTCCTG GCTATCTTGT TAATGTTTTT GTGCGTTTAT ATATTTCGAA GATTTGGAGC TCGGCTGATA CTTGATTCTG TGAAATTAAA AATACCTGTT TTTGGTGATT TAGTTATAAA AGCGAATGTT GCTCGTTTAA CTAGAACTGC CGCAATGCTT TTGGAAAGTG GAGTCCCTCT GAAAAACTCC TTGAGTATTG GAAAAAATGT TGTCAGTAAT CTAAAAATAC GAAGAGATAT AGATAAAATT ATTCACGGTA TACAGGAAGG CCAGAGGATG ACATATTGTA TGTGTGGATT GGAAACTTTC CCAGATCTAT GCAACAGATT GATATCTGTA GGAGAAGAAA CAGGGACCCT AGATGAAACA TTGAAACGAA TTGCTAATTT ATACGAGAGG GAATTGAGTT TAAATGTCAA ACAAATAACG GCTTTAATAG AGCCATTAAT GATATTAATT ATGTCCTTAA TAATCGGATT ACTTGTCTTG GCTGTTATCA TACCTGTTAT TGAATTATGG AAAATTTTCT AA
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Protein sequence | MIKYYYRAKS WTGEEIKGFI TADSRETAIL NLTNENFCLI ELKNYSKRDS LFEYIRKFLD PVTSKELMLF TSQFSTMVRC GIPVIESLDL QTQQLGNKNL TRGLTIVIKS LNSGKSLREA FSDASETFPW LITEMVGAGE ESGRLDEILD RLALHYEQEY TLSQKLKSAI SYPILLIILA MVVVYILLTV IFPQFINLFE AQGAELPFIT RMIFDSGIWM TENFSLIFVL AILLMFLCVY IFRRFGARLI LDSVKLKIPV FGDLVIKANV ARLTRTAAML LESGVPLKNS LSIGKNVVSN LKIRRDIDKI IHGIQEGQRM TYCMCGLETF PDLCNRLISV GEETGTLDET LKRIANLYER ELSLNVKQIT ALIEPLMILI MSLIIGLLVL AVIIPVIELW KIF
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