| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_1683 |
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| Symbol | |
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| ID | 6315547 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010718 |
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| Strand | - |
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| Start bp | 1757986 |
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| End bp | 1759752 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 642644059 |
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| Product | transcriptional regulator |
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| Protein accession | YP_001917845 |
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| Protein GI | 188586300 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0451023 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.0113335 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTGGATA ATAAATTAAG TAACAGCTTT CATGTCAATG AAAGTGAAAT CAAACAGATA
TTAAATTCAA CTCATGATGG CATGCTTGCC GTTGATGATC AAGGTATTGT AACTTTATTT
AATAATGCAG CCGAGAGGAT CACAAATATA AAAAAAGTAG ATGTACTCGG TAAATATGCC
GAAAAAGTAA TTCCAAATAC CAGGCTCCCT ATAATCTTAC AAACTGGCGT CCCGGAATAT
AATCGTCGAC AGGAACTTGA TCAAAAAACT ACAATAATAA CAAATAGAGT GCCAGTTTTT
GACGACCACG ACAATATAAT GGGAGCTGTA GCTGTTTTTA GAGATATTAC TGAAGTGATT
TCCCTAGCCG AAGAAGTAAC TGATCTCAAA GAGATTGAAA GCATGTTAAA GGCGATTATT
AATTCGACTC AGGATGCTAT TTCAGTTGTC GATGAAGACG GATTAGGAAT TTTAATTAAT
CCAGCTTATA CGGAATTAAC TGGATTAACT GAAGAAGATG TAATTGGTAG GCCTGCAACA
GTAGACATAG CAGAAGGCGA GAGTATGCAC TATAAAGTAT TGCAGACTAT GGATTCAGTT
AAAAACGTAC CTATGAAAGT TGGGCCAAAT AAAAAAGATG TAATTGTCGA TGTAGCCCCT
ATCGTAGTTG ATGGAAAATT GAAAGGAAGT GTAGGTGTAA TACACGATGT TTCTAAAATA
AAACAGTTAA CTGAAGAACT TAATGAAGCC AAGAGTATAA TTAGAAAATT AGAGGCTAAA
TATACCTTCG AAGATATAAT TGGTCTATCA GAAGATATTG AGACTGCTAT TCAACTGGCT
AAAACTGCAG CCACTACTCC TGCTACTGTT TTATTAAGAG GTGAAAGTGG AACGGGAAAA
GAGCTCTTTG CTCATGCCAT TCATAATACT AGTGAAAGGA AATATAATCC CTTTGTCAGA
GTTAATTGTG CGTCACTTCC TGAAAGTTTA CTAGAAAGTG AATTATTTGG GTATGAGGAA
GGTGCCTTTA CTGGAGCTAA GAAAGGTGGT AAAAAAGGAG TTTTTGAACA AGCCAAAAAT
GGGACAATTT TTCTTGACGA GATTGGAGAA ATGACTTTAA ATTTACAAAC TAAATTATTA
AGAGTTTTGC AAGAATGGGA AATTGTGAGA GTTGGTGGAG AAAGACCGAT TTCTATAAAC
TGTCGAGTAA TTGCTGCTAC TAACAGAGAA TTAGAAAAGG CTGTAAATGA AGGGGATTTT
AGAAGAGATT TGTACTATAG ATTAAATGTT ATACCAATCC GAATCCCCCC ATTACAGGAA
CGCACTGAAG ACATTCCATT ATTGGCCCAA CATTTAATTA AAAAATTTAA TCAAGAATAT
GGCAGAAATG TTAAAGAAGT TTCTAACGAA GCTTTGAAAA TTTTAGAAAG TTATCACTGG
CCAGGAAATG TTCGGGAACT AGAAAATTTT ATTGGTAGAG CAATGATTAA TATGAATATG
AAAGAGTTTG AAATCAAACC CAAACACTTA CCTCCAATTC ACACTCTTGC GGAAAAAAAT
CAGGCCCCAT TAATTGCTCC AGGAATGGAA CTTTTAAGTA ATGATAATCA GATGAGTTTA
AAAGACATCC TAACAGAAAC GGAAAAGCAG GTAATTAAAC AAACATTAGA AGACTATAAT
GGCAATAGAG AACAAGCTGC CAAACAATTG GGGATAGGTT TGAGAACTTT GTATTATAAA
TTAGAAAAAT ATCAAATCAA TCAATAA
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| Protein sequence | MVDNKLSNSF HVNESEIKQI LNSTHDGMLA VDDQGIVTLF NNAAERITNI KKVDVLGKYA
EKVIPNTRLP IILQTGVPEY NRRQELDQKT TIITNRVPVF DDHDNIMGAV AVFRDITEVI
SLAEEVTDLK EIESMLKAII NSTQDAISVV DEDGLGILIN PAYTELTGLT EEDVIGRPAT
VDIAEGESMH YKVLQTMDSV KNVPMKVGPN KKDVIVDVAP IVVDGKLKGS VGVIHDVSKI
KQLTEELNEA KSIIRKLEAK YTFEDIIGLS EDIETAIQLA KTAATTPATV LLRGESGTGK
ELFAHAIHNT SERKYNPFVR VNCASLPESL LESELFGYEE GAFTGAKKGG KKGVFEQAKN
GTIFLDEIGE MTLNLQTKLL RVLQEWEIVR VGGERPISIN CRVIAATNRE LEKAVNEGDF
RRDLYYRLNV IPIRIPPLQE RTEDIPLLAQ HLIKKFNQEY GRNVKEVSNE ALKILESYHW
PGNVRELENF IGRAMINMNM KEFEIKPKHL PPIHTLAEKN QAPLIAPGME LLSNDNQMSL
KDILTETEKQ VIKQTLEDYN GNREQAAKQL GIGLRTLYYK LEKYQINQ
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