Gene Nther_1664 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1664 
Symbol 
ID6317073 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1739910 
End bp1741097 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content36% 
IMG OID642644040 
ProductSerine-type D-Ala-D-Ala carboxypeptidase 
Protein accessionYP_001917826 
Protein GI188586281 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1686] D-alanyl-D-alanine carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.654771 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.132453 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGTCAGGA AAATTAGTTT AGTTTTAGTT TTATTTTTAG CAATAAGTTT AGTTTTTCAA 
GGATCAACTG CAAAAACAAG TCCGGAAGAC GAATTAGAGG CACCTGTCTA TCTTTTAGGT
GAACCGAAAT CGGGTGAGAT TCTCTTAGAA CAAGATAAAC AGGAACAAGT ATATCCAGCT
AGTATAACTA AAATAATGAC ATTGCTGCTG ACTATGGAAG CTTTAGAAAA TGAGCAAATA
GCTTTGGAAG AAGAAGTTAT TGTTCCTAGA GAAGCCGAAG ACATTCCCGG TACCACAATA
TTTTTGCAAC AAGGTGAAAA AATAACGGTA GATGATCTAA TAACAGCCAT AGCAGTTGGT
TCGGCAAACG ATGCTTCAAT TGCAATAGCT AAGCATATCT CTGGTACTGT AGATAATTTC
GTAGATGAAA TGAATGATAA AGCTAGAGAA CTAGGAATGA AAAACACTAA TTTTGAAAAT
CCCCATGGCC TCCATCATGA CGAACATGTA ACCACAGCCG AGGATATATT TATTATGGCG
TCTGAACTGG GAAAATATGA AGAAATTCAC GATTGGCTTG AAATTTGGCT AATTGAAGAT
TTCTTACAGG GCAAAAAAGT GGTTGAAGAT GATGAAGAGG GAATTTTTTT GAGTAATACC
AACAGATTAG TTAATCAATA CCCTGGCTGT GATGGATTTA AGACCGGATT TACTGAAGAA
TCCAAACACT CCATTACTGC GACAGCAAAA CAAAACGGTG AACGTTATAT AGCAATTATC
ATGAGTCATG AGGATTCAGA TGGAAGATTT GAAGAAGCTA TGAACCTGCT GGATTATGGT
TTTGCTAATT ATCAAACAAA TACAATCCTT GAAAAAGGGG ATTTGGTTGC CAGAGTAAAA
ATTAACAAAG GTGATCAAGA GTATCTTCCA TTATTAGTTA AGGAAGAACT CGTTGCGGTG
ACTGAGGAAT CAGATGAAAT TGAAATAGAA GAAGAACATC AAATTCCTGA TGATCTTTCC
CCTCCCATAG TTGAAGGTGA TAAAGTTGGT GAATATCAAA TTTCATATGG GAATAAGGAA
TCCCAAGTGG CTTTAATTGC AGGTGAAGAT GTTAAGGAAG CAGGGATAAC AGACCACTTT
TCTAGATTAA TTAAAAATTG GATGAGTTTT TGGACTGGCG AAAAATGA
 
Protein sequence
MVRKISLVLV LFLAISLVFQ GSTAKTSPED ELEAPVYLLG EPKSGEILLE QDKQEQVYPA 
SITKIMTLLL TMEALENEQI ALEEEVIVPR EAEDIPGTTI FLQQGEKITV DDLITAIAVG
SANDASIAIA KHISGTVDNF VDEMNDKARE LGMKNTNFEN PHGLHHDEHV TTAEDIFIMA
SELGKYEEIH DWLEIWLIED FLQGKKVVED DEEGIFLSNT NRLVNQYPGC DGFKTGFTEE
SKHSITATAK QNGERYIAII MSHEDSDGRF EEAMNLLDYG FANYQTNTIL EKGDLVARVK
INKGDQEYLP LLVKEELVAV TEESDEIEIE EEHQIPDDLS PPIVEGDKVG EYQISYGNKE
SQVALIAGED VKEAGITDHF SRLIKNWMSF WTGEK