Gene Nther_1652 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1652 
Symbol 
ID6316456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1729719 
End bp1730441 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content33% 
IMG OID642644028 
Productchromosome segregation and condensation protein ScpA 
Protein accessionYP_001917814 
Protein GI188586269 
COG category[S] Function unknown 
COG ID[COG1354] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value0.681706 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAATACC AGGTTTCTTT ACCTAATTTT GAAGGTCCTT TGGATCTTTT ATATCACCTG 
GTTAAAAAAG CGGAAGTAGA CATATATGAT ATATCCATAT CAGAGATAAC TGACCAATAC
TTATCTTATT TAGAAGAATG GGAAAGATTC AACTTGGAAA TTGCCAGTGA ATTTCTGGTT
ATGGCTGCTA GATTAATGGA ATTGAAATCA AGAGAGCTTC TTCCTAAACA GACTAATAAA
GAAACTGAAG ATGAAGAAGA AACAGACCCC AAGGAAGAGC TGTTGACTAA GATTATGGAA
TATCGCTATT TCAAAGAAAT AGCTTATCAT CTTAAAGAAA AAGAACAAGA AAGATTTCAG
GTATACTGGA GAGAACAACC TAAAATTCCT TTTCAGGAAC AAGAGGAAAT TCCCATTGGG
AATGTCGGTA TGCATGATTT ACTAAAAGCA TTTCAGAATG TACTAAAAAA ACAGGCTTTA
GATAATAAGG TTGAGACTAT AGACACTAAT GAAGTATCGA TATCAGAACA GAAGGATGTG
TTAATGAAAC TATTGAAAAA TAGAGAAAAG CAGACTATGC ATTTTCAAGA ATTGTTTGAA
CAATTCCCAA CTCGTTTAGA AATTATCGCA ACTTTCATAG CTTTATTAGA TCTTGTAAAA
GAAGGTAAAC TTTCAGTTTC ACAACAGGGA ATAAAAAGTC CATTGTGGAT CGAATTGTCT
TAA
 
Protein sequence
MKYQVSLPNF EGPLDLLYHL VKKAEVDIYD ISISEITDQY LSYLEEWERF NLEIASEFLV 
MAARLMELKS RELLPKQTNK ETEDEEETDP KEELLTKIME YRYFKEIAYH LKEKEQERFQ
VYWREQPKIP FQEQEEIPIG NVGMHDLLKA FQNVLKKQAL DNKVETIDTN EVSISEQKDV
LMKLLKNREK QTMHFQELFE QFPTRLEIIA TFIALLDLVK EGKLSVSQQG IKSPLWIELS