| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_1643 |
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| Symbol | |
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| ID | 6316533 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010718 |
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| Strand | - |
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| Start bp | 1722728 |
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| End bp | 1723444 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 642644019 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001917805 |
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| Protein GI | 188586260 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 0.734555 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGCTTAC AAAAATTCAT GTCAAGGGCT GGAATAGCAT CTAGACGCAA GTCAGAAGAA
CTCATCCAGC AGGGAAGAGT TACAGTTAAT GGACAAGTTA TTACACGTTT AGGAACTAAA
ATAAACCCTG ATACGGATAC GGTTAAAGTT GATGGCGAAC CAATAACTCA AGAGGAATCT
AATGTTTATA TCATGTTGAA CAAGCCCAAA GATTATATAA CCAGTAAAGA TGACCCTCAA
GGGAGAAAAA CTGTCATGGA TTTAATTCAG GTGAAAGAAA GAGTTTACCC AGTAGGTAGG
TTAGATTACG ATTCAAGAGG ATTAGTTTTA CTTACCAATG ATGGAGAATT AGCAAATAGA
TTAATGCATC CTAAATACAA TATCCCCAAA ACTTATATGG TTAAAGTAGA CAAACTTCCT
TTACAGGATA AACTTGATAA TCTAGTTAAT GGGATTTATT TAGAAGAAGG ACTATGTAAA
GCAGATCATG TGGAAATACT AGATACTAAA AATAATATAT TAAAAATTAT ATTATCAGAA
GGAAGAAAGA GACAGATTAG ACGCATGTTA GCTAGTTTAG GAATAGAAGT TAAGGATTTA
AAAAGGGACA GCTTAGGAAC TTTAACTTTA AAAGACTTAT CTGAGGGTAA TTATAGAAAA
TTAACAAAAG ATGAAATAGA TAACATAAAA AAATTAGCTG GTTTGACTGA TAATTAA
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| Protein sequence | MRLQKFMSRA GIASRRKSEE LIQQGRVTVN GQVITRLGTK INPDTDTVKV DGEPITQEES
NVYIMLNKPK DYITSKDDPQ GRKTVMDLIQ VKERVYPVGR LDYDSRGLVL LTNDGELANR
LMHPKYNIPK TYMVKVDKLP LQDKLDNLVN GIYLEEGLCK ADHVEILDTK NNILKIILSE
GRKRQIRRML ASLGIEVKDL KRDSLGTLTL KDLSEGNYRK LTKDEIDNIK KLAGLTDN
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