Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nther_1638 |
Symbol | |
ID | 6316528 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
Kingdom | Bacteria |
Replicon accession | NC_010718 |
Strand | - |
Start bp | 1718111 |
End bp | 1720228 |
Gene Length | 2118 bp |
Protein Length | 705 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 642644014 |
Product | hydroxymethylbutenyl pyrophosphate reductase |
Protein accession | YP_001917800 |
Protein GI | 188586255 |
COG category | [I] Lipid transport and metabolism [J] Translation, ribosomal structure and biogenesis [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0539] Ribosomal protein S1 [COG0761] Penicillin tolerance protein |
TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 0.32153 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGAAATAT TGGTTGCAAA AGGTGCTGGT TTCTGTAGCG GTGTTAATAG AGCCTTAGAT AAGACAATCC AAGCTGTACA AACTGATACA TCACGGGACA TTCAAGTTTT TACCCTTGGC CCCATTGTAC ATAATAAAGA GGTTATACAA AACTTAACAG AAAAAGGAAT AGGTATTATC GAAAATTTAA CCCAGCTCCA ATCGAAGAAA TGTTTAAGTG AAGAAACTAA TAATTATGTC GTTATTAGAA GTCATGGAGT TGGACCGGAA ACTTTTAAGA TGCTGAATAA TTTAAGTAAT ACGGATGTGA TTGACGCTAC TTGTCCTTTT GTTAGGAAGG TACAACAGAA AGCAAGTAAA TTATATCAAG ATGGGTATCA AATTTTCATA GTAGGTGATC CTAATCATCC GGAAGTGAAA GGAATTAAAG AATGGACTGA TAATAATGCC ATTGTGATTG AAAAACCTGA ACAAGTTAAT GATATAGAAA TATCTAATAA AACTGCTGTA GTTGCTCAAA CTACATTAAG AGAAGAAAAA TTTAATGAAA TTGTGGAAAA AATACTTGAT AGAAACCCAA ATACAATAGT TCATAACACT ATATGTGATG CCACTCAAAA ACGACAAACT GCCACTAAAG AGTTAGCAGG GCAAGTGGAT GTCATGATTG TCGTTGGAGG ATATAACAGC TCAAATACCA AAAAACTAAA AGAGTTAGCT GTCAAGGAAG GTGTACCTAC TTATCATATT GAGACAGCTA AGGAACTAAA AACAGATTGG TTTTTGGGCT GTAAAAAGAT AGGTGTGACG GCAGGGGCCT CGACACCTGA TTGGACTATA AAGGAGGTAG TTGGTAAAAT GAGAGAATTT GAAGAGCAAA ATGAAAACCT TAATACTAAT TCAGATGAGT CAACTCAAGA AAGCCAAGAT GAATTAATGA AAGCAACAGA AGATTCGGCT GACAAACTTG ACAGGGGACA AGTCGTTAAA GGAAAGGTAG TTAAAGTAAC AGAAGATGAA GCAATGATTG ATGTAGGTTA TAAATTTGAA GGCTCAGTAC CAGTTAACGA AATGCCAATA AAGGAAGGAG AATCTCTAGA GGATTTACTT TCTGAGGGAG ACGAAATTGA TGTTAAAGTG GTGAAAGTTG ATGACGAAGA AGGACAATTA ATACTTTCTA AAAAATGGGC TGACAAAGAT AAACAATGGG AGCAATTGGA ACAGCTTATG GAAAATGATG AAGAAATCAA AGCACAAGTG ACAGAGGAAG TCAAAGGTGG TTTGGTCGTT GATTTAGGTC AATTACAAGG GTTTATACCA GCCTCCCACG TAGACATACA TTATGTACCC GATTTAAGCA AGTATGTGGG AGAAGAATTG AGACTGAAAC CCATAGAATT GGATCGTTCT AGAAATAAGA TAGTACTAAG CCAGAAAAAT ATTTTAGAAC AGGAACAGGA AGAAAAGAAA AATAAAACCA TGGAAACTAT TACAGAAGGT GATATCGTCG ACGGAACCGT TAAAAGGTTA ACCGATTTTG GAGCCTTCAT CGATATCGGT GGAATTGATG GTTTATGTCA TATTTCTCAA ATTTCACATA GTAGAATTGA CCATCCTGAA AGTGAATTAG AAACTGGGGA AAATGTTAAG GTAAAAGTAT TAAGCTTAGA TCCTGAAAAT GAACGTATAT CATTAAGTAT TAAAGAAGCA CAGCCTGATC CCTTTGAAAC TTTTATGAAA CAGTATAAAT CTGGAGATAT CGTTCAAGGC AAGGTTGTTA GAACTGTTAA TTTTGGTGCA TTTATTGAAA TCACACCAGG TGTTGAAGGA CTTTGTCATA TTTCTCAATT ATCCGATGAT CATGTTGCTA AAACCCAAGA TGTAGTTAAT GAGGGTGATC AAGTTACCGT CAAAATATTA AGTATAGATG ATCAGCAGAA AAAGGTTAGT TTAAGTATCA AAGAAGCTCA GGGAAAAAGC AAAAAAGAAC AAGAACAAGA AGAGTTTGCA AAATATCAGG ATAGTCAAGA GGAAGAAGAA GGTGTGAAAT TAGGAGATAT GTTTGGTGAT GTACTAGAGG AAATAAAGGA AGATGATAAG GATGATAAAT CGAAGTGA
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Protein sequence | MEILVAKGAG FCSGVNRALD KTIQAVQTDT SRDIQVFTLG PIVHNKEVIQ NLTEKGIGII ENLTQLQSKK CLSEETNNYV VIRSHGVGPE TFKMLNNLSN TDVIDATCPF VRKVQQKASK LYQDGYQIFI VGDPNHPEVK GIKEWTDNNA IVIEKPEQVN DIEISNKTAV VAQTTLREEK FNEIVEKILD RNPNTIVHNT ICDATQKRQT ATKELAGQVD VMIVVGGYNS SNTKKLKELA VKEGVPTYHI ETAKELKTDW FLGCKKIGVT AGASTPDWTI KEVVGKMREF EEQNENLNTN SDESTQESQD ELMKATEDSA DKLDRGQVVK GKVVKVTEDE AMIDVGYKFE GSVPVNEMPI KEGESLEDLL SEGDEIDVKV VKVDDEEGQL ILSKKWADKD KQWEQLEQLM ENDEEIKAQV TEEVKGGLVV DLGQLQGFIP ASHVDIHYVP DLSKYVGEEL RLKPIELDRS RNKIVLSQKN ILEQEQEEKK NKTMETITEG DIVDGTVKRL TDFGAFIDIG GIDGLCHISQ ISHSRIDHPE SELETGENVK VKVLSLDPEN ERISLSIKEA QPDPFETFMK QYKSGDIVQG KVVRTVNFGA FIEITPGVEG LCHISQLSDD HVAKTQDVVN EGDQVTVKIL SIDDQQKKVS LSIKEAQGKS KKEQEQEEFA KYQDSQEEEE GVKLGDMFGD VLEEIKEDDK DDKSK
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