| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_1627 |
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| Symbol | |
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| ID | 6314774 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010718 |
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| Strand | + |
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| Start bp | 1708070 |
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| End bp | 1708693 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 642644003 |
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| Product | Peptidoglycan-binding LysM |
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| Protein accession | YP_001917789 |
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| Protein GI | 188586244 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02899] spore coat assembly protein SafA |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.000379646 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | TTGAGTAGAC ACTGGAAAGA ACGTGGACGC AGGAAGCCAC CTGAGTGTCC AGGTTTCATT
TACACGGTTA GACCTACTGA TACACTTTTT AAAATAGCCC GACGGTTTTG CGTAGATTTA
GACCGTTTAA TTGAATTAAA TCCTCAAATT GATGATCCAG ATTTAATTTT TCCAGGAGAT
CAAATTTGCA TCCCAAAGAA AGTAGAAGAT AGAATTCCTA AAGTTGAAGA CGTTGAATTC
TTTGATAAGA AAAAACGCGA ATTACCAGAA AAAAGAAATC GTGTCCTCTT AGCTCCAAAA
ACTATTGTAA AAGCCACCTT TTCCATTCCA GTAGATGAAG CGTTTTTACT GTTTACTCCA
GAACAAGAAG ATACAGAATT AATTCAAGCA GTTACCGTTG ATGAAGAAAG GCAGGTTAAA
TTCTTCTGGA AGGTACCGAA AGGTATTAAA GGGGTAGTTT TCGTTATCGG ATGTGCTAAT
CAAGTTTGTG GCAGATCAGA GGATATACCA GTTATATCAA AACGCCGAAG AAGAAGGAAA
CCATACTCCG CCGGTGAAGA GAATTATCAA GATGAAATAG AAATAGACGA AAGTGAATAC
TTTGAAGACG ATGAAGAATA TTAA
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| Protein sequence | MSRHWKERGR RKPPECPGFI YTVRPTDTLF KIARRFCVDL DRLIELNPQI DDPDLIFPGD
QICIPKKVED RIPKVEDVEF FDKKKRELPE KRNRVLLAPK TIVKATFSIP VDEAFLLFTP
EQEDTELIQA VTVDEERQVK FFWKVPKGIK GVVFVIGCAN QVCGRSEDIP VISKRRRRRK
PYSAGEENYQ DEIEIDESEY FEDDEEY
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