Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nther_1621 |
Symbol | |
ID | 6315384 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
Kingdom | Bacteria |
Replicon accession | NC_010718 |
Strand | - |
Start bp | 1699883 |
End bp | 1700719 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 642643997 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001917783 |
Protein GI | 188586238 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4176] ABC-type proline/glycine betaine transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000001583 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0000000544844 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGATAACGA TGATTCCTAG AATACCTATT GGAGACTGGT TTGAAAGTAT TATAGACTGG ATAGAAGAAG TTTTTGCTGT CTTGTTTGAT ATTATTGATG TTGTGATTGA AGCTATCGTT GGATCTTTCA TGTACGTTTT CGATACAATT TCAGTTCAAT TATCACCATT CGTAGTAATT ATTTTGCTAG CAGCTTTAGC ATGGAGATTA AGTGGACTAG GAGTTGGAAT TTTCACTTTA CTGGGCTTTA GCCTTATAGT AAGTATGGAC CTATGGGAAC CGACTATGGT TACCTTTTCA ATGATCTTAA CTGCAGGTAT TGTGGCTTTA GGACTTGGAA TACCCATTGG TATTCTGGCA TCAAAAAATG AAGTAGTAAA TACAATTGTA CGACCGGTTC TCGACTTTAT GCAGACCATG CCAGCTTTCG TCTATCTGAT TCCGGCAGTT ATATTCTTTA GCCTTGGTTT GGTTCCAGGA GTTATAGCCA CAGTTATCTT TGCTATGCCT CCTGCAATTA GGCTAACTAA CTTTGGAATT AGGCAAGTGG ATAAGGAAGT AATTGAGGCA GGTCGAGCTT TTGGATCAAC ATCAAGTCAG CTATTATTTA AAGTACAACT GCCTTTGGCT GTCCCAACAA TTATGGCTGG TGTTAACCAA ACAATTATGC TGTCACTTTC CATGGTTGTT ATCGCATCCA TGATCGGTGC CGGTGGTTTA GGTAATATTG TATTAAGAGG TATAACACAG CTGGACATAG GAACAGGTTT TGAAGGTGGT TTATCTGTAG TTATTTTAGC AATATTCTTA GATAGAATCA CTCAAAGTCT TCAATAA
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Protein sequence | MITMIPRIPI GDWFESIIDW IEEVFAVLFD IIDVVIEAIV GSFMYVFDTI SVQLSPFVVI ILLAALAWRL SGLGVGIFTL LGFSLIVSMD LWEPTMVTFS MILTAGIVAL GLGIPIGILA SKNEVVNTIV RPVLDFMQTM PAFVYLIPAV IFFSLGLVPG VIATVIFAMP PAIRLTNFGI RQVDKEVIEA GRAFGSTSSQ LLFKVQLPLA VPTIMAGVNQ TIMLSLSMVV IASMIGAGGL GNIVLRGITQ LDIGTGFEGG LSVVILAIFL DRITQSLQ
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