Gene Nther_1621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1621 
Symbol 
ID6315384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1699883 
End bp1700719 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content38% 
IMG OID642643997 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001917783 
Protein GI188586238 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4176] ABC-type proline/glycine betaine transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000001583 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0000000544844 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGATAACGA TGATTCCTAG AATACCTATT GGAGACTGGT TTGAAAGTAT TATAGACTGG 
ATAGAAGAAG TTTTTGCTGT CTTGTTTGAT ATTATTGATG TTGTGATTGA AGCTATCGTT
GGATCTTTCA TGTACGTTTT CGATACAATT TCAGTTCAAT TATCACCATT CGTAGTAATT
ATTTTGCTAG CAGCTTTAGC ATGGAGATTA AGTGGACTAG GAGTTGGAAT TTTCACTTTA
CTGGGCTTTA GCCTTATAGT AAGTATGGAC CTATGGGAAC CGACTATGGT TACCTTTTCA
ATGATCTTAA CTGCAGGTAT TGTGGCTTTA GGACTTGGAA TACCCATTGG TATTCTGGCA
TCAAAAAATG AAGTAGTAAA TACAATTGTA CGACCGGTTC TCGACTTTAT GCAGACCATG
CCAGCTTTCG TCTATCTGAT TCCGGCAGTT ATATTCTTTA GCCTTGGTTT GGTTCCAGGA
GTTATAGCCA CAGTTATCTT TGCTATGCCT CCTGCAATTA GGCTAACTAA CTTTGGAATT
AGGCAAGTGG ATAAGGAAGT AATTGAGGCA GGTCGAGCTT TTGGATCAAC ATCAAGTCAG
CTATTATTTA AAGTACAACT GCCTTTGGCT GTCCCAACAA TTATGGCTGG TGTTAACCAA
ACAATTATGC TGTCACTTTC CATGGTTGTT ATCGCATCCA TGATCGGTGC CGGTGGTTTA
GGTAATATTG TATTAAGAGG TATAACACAG CTGGACATAG GAACAGGTTT TGAAGGTGGT
TTATCTGTAG TTATTTTAGC AATATTCTTA GATAGAATCA CTCAAAGTCT TCAATAA
 
Protein sequence
MITMIPRIPI GDWFESIIDW IEEVFAVLFD IIDVVIEAIV GSFMYVFDTI SVQLSPFVVI 
ILLAALAWRL SGLGVGIFTL LGFSLIVSMD LWEPTMVTFS MILTAGIVAL GLGIPIGILA
SKNEVVNTIV RPVLDFMQTM PAFVYLIPAV IFFSLGLVPG VIATVIFAMP PAIRLTNFGI
RQVDKEVIEA GRAFGSTSSQ LLFKVQLPLA VPTIMAGVNQ TIMLSLSMVV IASMIGAGGL
GNIVLRGITQ LDIGTGFEGG LSVVILAIFL DRITQSLQ