Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nther_1607 |
Symbol | |
ID | 6315358 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
Kingdom | Bacteria |
Replicon accession | NC_010718 |
Strand | - |
Start bp | 1684367 |
End bp | 1685758 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 642643982 |
Product | MATE efflux family protein |
Protein accession | YP_001917769 |
Protein GI | 188586224 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000000142965 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 4.95515e-23 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGAGATTTG ATTTAGGCGA ACAAAAGAGA AGAAATTTAA TCTTGGAAGG CAATCTATTA AAAGTACTTT GGTTTCTTTC ATGGCCTGTA ACTATCCAAT TAGTAGTGAA CAATGTTGTT AGAGTTACGG GTACTAAAAT GGTAGGTGTC TTAGGGTCTG ATGCAATTGC TGCAGTAGGA ATTGCACAAC AAGTCCTTAT GGGTGTATCT GTACCAGCTA TGGGGTTATC TATGAGTGCT ACTGCAGTTG TTGCAAATTA TTTCGGAGAA AAAAATTACA CAGGAACTTT ATATGCAATT GGACAAATTA TATTAATAGC TCTATTATTA TCTGGTTTTA CAACTTTTAT CGGTTTAAAA TACGGTGACA ATATTTTATT ATTACTCGGA GCAGAAGAAC AATTATTACA ATTAAGCCAT AACTATTTAA AAATTTTGTT TGCAGCTTCC TTTGTTCTAA TAACCAAGTT TCCACTTTGG GGGATTTTTC AAGGATTAGG TGATACAAGG ATTCCGATGA AAATGGATCT TTTTTCTAAT GCTTTGAATG TATCAGGAAA TTATACTTTT ATTTTTGGCC TTGGTCCAAT CCCTTCTCTG GGATTAACGG GTGCTGCAGT TGGTAGTGTA TTGGCTGATG CGGTTATACT TGTGAGAGCT ATAGGAGAAT TAGCCAAAAA AATCTCGGGA TTAGTTCTCA GCTTTTATGA TTTATTTAAG ATACGTTTGG CAATTATGAA GAAAATAATT AAAATTGGTG TACCAGCTAC TTTACATGGT TTTATTCAGA TGAGTAGCAA TATTTTACTT ATCATGATGA TGACTCGTAT CCCGGGAGGT ACTGATGTGG TGTCTGCATA TTCAGTAGGA ATGGTTGTAT TTGGCTTAAC TACATTTCCT GCAGCTTCAA TAGCAACTGT AGCAGCTTCA ATGGTAGGTG TTAATTTGGG GAATTCAGAT CAAAACAGGG CTATCTCTAG TGGTTTTACC TGTGCAATTA CCGGTGCAAT GGTTATTACT TTCACAGCTA TTCTTACACG AGTTTTCGCA CCTGAACTAT TAAAGTTTTT CGTTAAAGAT TTATCTGTAA TTAAAATCGG TGACTCATTA TTAAAAACAC TTTCTCTTGT TATGCCTGTT CATGCTTTGG GAATTGTCTT TTCAAGAGGA ATGCAAGGAG CCGGGGACGC AAAAACACCT TTTATAATTG CTGCATTAAC AGGAGTAGGA GCTAGAGTGC CTCTGGCATA CATTTTTACT TTCAGTATGG GGATGCAAAG TAAAGGTATT TGGTTAGCCA TTGCAGTTAC ACAAGTTATC TCAGCTGTTA TTCTGACTTA TAAATTTAAA ACTGTAGTGA GGAAAAGAGC CGAAAATATT AAAAATTACT AG
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Protein sequence | MRFDLGEQKR RNLILEGNLL KVLWFLSWPV TIQLVVNNVV RVTGTKMVGV LGSDAIAAVG IAQQVLMGVS VPAMGLSMSA TAVVANYFGE KNYTGTLYAI GQIILIALLL SGFTTFIGLK YGDNILLLLG AEEQLLQLSH NYLKILFAAS FVLITKFPLW GIFQGLGDTR IPMKMDLFSN ALNVSGNYTF IFGLGPIPSL GLTGAAVGSV LADAVILVRA IGELAKKISG LVLSFYDLFK IRLAIMKKII KIGVPATLHG FIQMSSNILL IMMMTRIPGG TDVVSAYSVG MVVFGLTTFP AASIATVAAS MVGVNLGNSD QNRAISSGFT CAITGAMVIT FTAILTRVFA PELLKFFVKD LSVIKIGDSL LKTLSLVMPV HALGIVFSRG MQGAGDAKTP FIIAALTGVG ARVPLAYIFT FSMGMQSKGI WLAIAVTQVI SAVILTYKFK TVVRKRAENI KNY
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