Gene Nther_1578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1578 
Symbol 
ID6316282 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1659320 
End bp1660330 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content32% 
IMG OID642643950 
Productglycosyl transferase family 2 
Protein accessionYP_001917741 
Protein GI188586196 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1215] Glycosyltransferases, probably involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value8.854379999999999e-20 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACTGTGG CAGTCTCCAT CGTAATGGCT GTTTACAATG AAGAGAAATT CCTTCAACAA 
GCCATAGATA GTGCCTTGTC CCAAACCTAT CCCTCTACTG ATCTAATTGT CGTTAATGAT
GGATCTACTG ATTCAACCAA GACGATATTA GACAATCTAA ATGACCAACG AGTCACTGTA
ATACACCTAG AAGAAAATCA AGGTGCCGCA AACGCACTAA ATATTGGAAT TGAACAAGCA
AGTGGAAATT GGATATCAAT ACACGATGCA GATGACATCA GTTATCCTAC AAAAATCGAA
GAACAGGTAA AGTACATTAA ACAAAACCCT CAACTAGTAG GAGTTGGGAC ATTAGTGGAA
TATATAGCAG GTAGTCCTAA TGTAACACAA AAACTGCTTA AAAGATTAGT AAAAATCAAT
AAATCTGTAA TATCGGCAGA ACAGATAAAC AAATCTAAAT ATTATATATG CTATCTGACT
CATAGTTCAA TGATGTTCTC AAAGGAACTA TTTTGGGTAG TGGGCGGTTA TAACCCAGAA
TTTAATATCC TTTATGACTA TGATTTATGG CTAAGACTTT TGGAAGAAGG AAATATAGCA
AAAGTTCCTA AAGTATTGTT AAAATATCGC GTTCACCAGG ATTCACTTTC TAGAAAAAAC
AGGTATAAGA CAGTTAATGA AATTCAAATT GCATCTTCCA AGGCAATTTG TAGATTATTA
ATTCATAATA AACAGACTAT ACAACCAAAA GTAGTTGTTA TTGGCCCTCA AAAAGCTTGT
GAAAATTATG AGTGCAATAT TGCACCTACT AGCGGTTTAC AAGTTATCAG TACAATAACC
AAAAATTCTA AAAAAGAAAT TTCAAAAATT ATTAAAAAAT ATCACAAAGG TCAAATAGAT
GGAATTATAA TGCTTGGTCG TTCTCCTAAA CAAAAGTACC ATCATATTTT GAAAACAGCT
GGATTAACTT CTAATAGAGA TTATTTCACT GTTTTCAATA TTCTTAAATA A
 
Protein sequence
MTVAVSIVMA VYNEEKFLQQ AIDSALSQTY PSTDLIVVND GSTDSTKTIL DNLNDQRVTV 
IHLEENQGAA NALNIGIEQA SGNWISIHDA DDISYPTKIE EQVKYIKQNP QLVGVGTLVE
YIAGSPNVTQ KLLKRLVKIN KSVISAEQIN KSKYYICYLT HSSMMFSKEL FWVVGGYNPE
FNILYDYDLW LRLLEEGNIA KVPKVLLKYR VHQDSLSRKN RYKTVNEIQI ASSKAICRLL
IHNKQTIQPK VVVIGPQKAC ENYECNIAPT SGLQVISTIT KNSKKEISKI IKKYHKGQID
GIIMLGRSPK QKYHHILKTA GLTSNRDYFT VFNILK