Gene Nther_1549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1549 
Symbol 
ID6316758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1632224 
End bp1633483 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content36% 
IMG OID642643923 
ProductKWG repeat protein 
Protein accessionYP_001917714 
Protein GI188586169 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.00077651 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGACATCAC GGAGATTGCT AATTGTTTTT TTATTTACTC TCTTAATTCT AGTTGGCTGT 
AATAATGAAA CGGAAGTAAA AGAGTCGAAG GAAATGGAAG AGCCAACTAC AACAGTAAAA
GGAATCGAAG ATTTTAATTT TATTGTAGAA CCTAAATATG AAGATGCCTG GCCTTTTTCT
GAAGGGCTAG CTAGGGTTAA ATTAGACGGT TTATGGGGAT TTGTAGATGA GGATGGGAAA
GAAGAGATTG AACCTAAGTA TGAACACGCT TCTCGATTTT CAGAGGGATA TTCTTCCATC
CGATTGGATG GAGAAAGTGG CTATATAGAC AAAACAGGTG AATACCTGAA AGAACCCAAA
TTTGATCGAG CTTTATCTTT TAATGACGGA ATAGCACTAG TTGAATTAGA TGGCAAGCAA
GGGATTATAG ACGAAAAAGG GAACTACGTC ATAGAGCCTG TTTTTGATAG TCTTAAGCCA
ACGATAGCGA ATAACCTGAT TGTAGCTAGT CCTCATGAAA AGGATGGAAA TTATTATGGT
TATATAAATA AAGAAGGTGA ATATATAATA GATCCCAACT ATTCCAGAGC TAAGAATTTT
TCAAAAGGCC TGGCTGCCGT TGAATGTAAA GATACTGATT TATGGGGTTT CATTGATGAA
AAAGGAGAAT ATGTGATTGA ACCAAAATTT AATAACGCTC GTTCTTTTAC TGGCCAGGAA
GAGCTAGCTG CCGTAAGCAT TGAAGACTAC ATTGAAGTGG AAAGAGAACT TAATGATGAC
AAAACTGAAG TTAAAGAACA TGTTGAACTT TGGGGATTTA TTGATAAGTC GGGGGAATAC
GCCATTGAGC CTCAGTTTAA AACTGCCAAT GAATTCAGAG ATGGAATGGC TTCTGTAACA
AACTTTGAGG GAAAGATTGG ATATATCAAC CAAAAAGGTG ATTATATAAT AGAACCTCAA
TATACAGGAG CAGACATTTT TAAAGATGGT ATAAATCGGG TTCAAAAAGA CGGCAAGGAT
GGTTTTATAA ATGAGGAAGG AGAGTACATT ATCGAACCAA ATTATCTCTC AGCCTGGCCT
TACGAAGGTG AGGGCTTTGT TAGTGTAGAT ACTGGTGAAC AACAGACAAT TTATAATTTA
GACGGTGAAA TTGAATTTAA AGTAGATCCC GACATTGACT GGTTAGGACA TATTTCCAAA
GAAACAGCTG TTATTATCAT AGATGGAGAG TATGGGTATG TAGAAATAGA AAATAATTAA
 
Protein sequence
MTSRRLLIVF LFTLLILVGC NNETEVKESK EMEEPTTTVK GIEDFNFIVE PKYEDAWPFS 
EGLARVKLDG LWGFVDEDGK EEIEPKYEHA SRFSEGYSSI RLDGESGYID KTGEYLKEPK
FDRALSFNDG IALVELDGKQ GIIDEKGNYV IEPVFDSLKP TIANNLIVAS PHEKDGNYYG
YINKEGEYII DPNYSRAKNF SKGLAAVECK DTDLWGFIDE KGEYVIEPKF NNARSFTGQE
ELAAVSIEDY IEVERELNDD KTEVKEHVEL WGFIDKSGEY AIEPQFKTAN EFRDGMASVT
NFEGKIGYIN QKGDYIIEPQ YTGADIFKDG INRVQKDGKD GFINEEGEYI IEPNYLSAWP
YEGEGFVSVD TGEQQTIYNL DGEIEFKVDP DIDWLGHISK ETAVIIIDGE YGYVEIENN