Gene Nther_1547 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1547 
Symbol 
ID6316756 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1630120 
End bp1631265 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content37% 
IMG OID642643922 
Productaminotransferase class V 
Protein accessionYP_001917713 
Protein GI188586168 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.000755241 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGAAGATGA ACCGTGAACT TGTGATGATA CCAGGACCAA CTCCGGTCAC TGAACCAATT 
CGAAACGAGA TGGAAAGAGA AACAGCGGCT TTTAAAGATC CCAATTTTAT TGAAGACTTT
CAACAAGTAA TATCTGACCT TAAGAATTTA TGGGGAAGTA GTGAAGTGTT TGTTGTTGCT
GGTTCCGGAA CTCTTTCAAT GGAAATGGCT ATATCTAACA CTCTTAAAAA ATCTGATCCA
GTATTGGTGA TATCTCATGG TTTTTTTGGA GATAGAATGG CAGAACTCTG TGAAAGAAAA
GGATTGGAAG TAGACGTCCT ATCATGTGAA TGGGGAAAGG CAGTACCTGT AGAAGAAGTT
GAAAAAAAGT TGTCAAATAA AAATTATCGG GCAGTGACAG TTACCCATGT AGACACATCA
ACTGGTACCA AGGCACCACT TGAAGAGCTT GGAAAATTAT TGGATAAGCA TCAAGACACA
CTGTTTATAG TTGATGGTGT ATGCTCTACT GCAGGAGAAC CTGAATTTAT TAATGAAATG
GGGATTGACA TCCTGCTCAC TGCTTCACAA AAAGCCTTTG GAGTACCGCC AGGTCTTGCT
ATAGTTTGGG CAAGTGATAA AGCTTTAAAA AGAAGAGAAA AAATCGGGGA AATCTCTGAA
TACTATGCTG ACTTTAATAA ATGGCTGCCA ATAATGAATG ATCCCAGTAA ATATTTTGGC
ACTCCACCCG TTAATCTAAT TTGGGCTTTA AAAAAATCTT TAGAATTTAT TAAAACAGAA
GGACTGAAAG AACGGTTTAA GCGCCATCAA GTTAGAGGTA AAGCAATTCA GAAAGCTTTG
GAAGGTATAG GTTTAAATAT ATTGGCAGAA GAAGGTGCCC GTGCATCTAC AATCTCTAAC
GCACTCTATC CAGAAGGAAT TGATGATACA TTCCGGAAAG TTCTTAAAGA AGAGGGAGTT
GTAGTAGCAG GTGGACTTGG GCCTTATGCT GACAAACTAT TTAGGTTAGG GCATATGGGC
AATATAGATA TTAACGAATT GGTTACAGTG ATATCATCTA TAGAGAGAAC TTTATTCAGA
TTAGATTATC CAGTTGAATT TGGTAAAGGA GTTAATATTT TTCTAGATAA TATTATGAGA
AATTAA
 
Protein sequence
MKMNRELVMI PGPTPVTEPI RNEMERETAA FKDPNFIEDF QQVISDLKNL WGSSEVFVVA 
GSGTLSMEMA ISNTLKKSDP VLVISHGFFG DRMAELCERK GLEVDVLSCE WGKAVPVEEV
EKKLSNKNYR AVTVTHVDTS TGTKAPLEEL GKLLDKHQDT LFIVDGVCST AGEPEFINEM
GIDILLTASQ KAFGVPPGLA IVWASDKALK RREKIGEISE YYADFNKWLP IMNDPSKYFG
TPPVNLIWAL KKSLEFIKTE GLKERFKRHQ VRGKAIQKAL EGIGLNILAE EGARASTISN
ALYPEGIDDT FRKVLKEEGV VVAGGLGPYA DKLFRLGHMG NIDINELVTV ISSIERTLFR
LDYPVEFGKG VNIFLDNIMR N