| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_1544 |
|---|
| Symbol | |
|---|
| ID | 6316753 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010718 |
|---|
| Strand | - |
|---|
| Start bp | 1626413 |
|---|
| End bp | 1627588 |
|---|
| Gene Length | 1176 bp |
|---|
| Protein Length | 391 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 642643919 |
|---|
| Product | Mandelate racemase/muconate lactonizing protein |
|---|
| Protein accession | YP_001917710 |
|---|
| Protein GI | 188586165 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
|---|
| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
|---|
| TIGRFAM ID | [TIGR01928] o-succinylbenzoic acid (OSB) synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.000155525 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGAAC AAGCTATCAT CGAAAAAGTA AGAATCATTG AAGTCAATAT GCCTTTTACA
AATCATATTC AGGTGGGAGA AAGCTCTAAT AAACTTCGAA AATCATTAAT CATTGAGTTA
CACTCAGAAG GTATTATTGG CTATGGAGAG TCTGCGCCTT ACGGCGAACC ATTCTATTCA
GGAGAGACCA TTTCTACAGT AAAGCCTATC CTCAAAGAAA ACATTTTACC TAAAATAGTA
GGAAAAGAAA TCAGTTCAAT TGAACAATTA AATCAATTAA TCAACACCCA GATAAAAGGT
AATAACTTTG CCAAGGCCGG GGTAGAAACG GCCTATTGGG ATTTAATAGC TAAGAAAAGA
AATATACCAT TAAAACAACT CATTCACGAA AAATTAATGG AAATCGGGGT GAATGACCCT
TCTTTAAATA ATACCAATTA TATTTTAAGT GGTGCTGCAA TGGGTATTCC CCCGGGAGAA
AAAGAAGACA ATTTAGTAGA ACAAGTAAAA AGTGCTTTGG AAGAAGGTTA TCAAAAAATT
AAAATAAAAG TGTCTCCAGG ATTTGATATC AATGCCATAG AAAAAGTTTT GAAAGTTATA
CCTGATGATA TAAATTTTTG GATGGATGCT AGCGCTTCAT ATAACATAAA AAATCATTTA
CCGATATTAA AACAAATTGA CTCTTACAAT ATTGATTTTT TAGAACAGCC TTTAGCACAT
GACGATATTT TAGAGCATAG CCAGTTAAGC CAAGAAGTGA CTACTCCCAT CTGTTTAGAT
GAATCTTTAT ATTCTGCAAA GATAGCGGAA AATTCTCTTG GTCTCGGTTT TAACCAAATT
TGGAACATTA AAATCCAACG CATCGGTGGG CTATTAGAGG CGCTTAAGAT TTATAAGTTA
GCATCTGAAA ATAACGTCAG TGTGTGGGGC GGTACTATGC CTGAAACTGG TATTGGAGCT
ATTTTTATGT TAGCTCTTGG AACTTATTCA AACTTTACTT ATCCTTCAGA TGTTGCAGAT
AGCACGAAAT GGTATGGTAA TAATAACGAT CTAAAGGATT TAAAAATGAC CGGGGAGGGG
AAAATCTTCT ACTCCGATGA GATAGGAATT GGTGAAATCA ATCATTATAA TTATAGAAAA
TATGGACATT TAGTTCATGA AGTAAATGGG TATTAA
|
|---|
| Protein sequence | MKEQAIIEKV RIIEVNMPFT NHIQVGESSN KLRKSLIIEL HSEGIIGYGE SAPYGEPFYS
GETISTVKPI LKENILPKIV GKEISSIEQL NQLINTQIKG NNFAKAGVET AYWDLIAKKR
NIPLKQLIHE KLMEIGVNDP SLNNTNYILS GAAMGIPPGE KEDNLVEQVK SALEEGYQKI
KIKVSPGFDI NAIEKVLKVI PDDINFWMDA SASYNIKNHL PILKQIDSYN IDFLEQPLAH
DDILEHSQLS QEVTTPICLD ESLYSAKIAE NSLGLGFNQI WNIKIQRIGG LLEALKIYKL
ASENNVSVWG GTMPETGIGA IFMLALGTYS NFTYPSDVAD STKWYGNNND LKDLKMTGEG
KIFYSDEIGI GEINHYNYRK YGHLVHEVNG Y
|
|---|
| |